RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 EFCAB12Q6NXP0 572 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 CKAP2LQ8IYA6 745 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 SPEM1Q8N4L4 309 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 LINC01465Q8N7H1 131 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 OTUD7AQ8TE49 926 aaPredicted RBP14.11□□□□□ -0.15
SNRPF-204ENST00000552085 EVI5LQ96CN4 794 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 SCLT1Q96NL6 688 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 PLA2G2FQ9BZM2 168 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 MARCH5Q9NX47 278 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 IGSF10Q6WRI0 2623 aa14.11□□□□□ -0.15
SNRPF-204ENST00000552085 ZNF623O75123 536 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 EFEMP2O95967 443 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 CCNE2O96020 404 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 CEACAM1P13688 526 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 MX1P20591 662 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 ITGB3BPQ13352 177 aaPredicted RBP14.1□□□□□ -0.15
SNRPF-204ENST00000552085 GAS6Q14393 721 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 FAM3CQ92520 227 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 BBC3Q96PG8 261 aaPredicted RBP14.1□□□□□ -0.15
SNRPF-204ENST00000552085 MSRB2Q9Y3D2 182 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 PCDHGA5Q9Y5G8 931 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 NAV2Q8IVL1 2488 aa14.1□□□□□ -0.15
SNRPF-204ENST00000552085 EML5Q05BV3 1969 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
SNRPF-204ENST00000552085 HNRNPA1P09651 372 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNRPF-204ENST00000552085 CHRNB1P11230 501 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 RAP1GAPP47736 663 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 RAB27AP51159 221 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 COL28A1Q2UY09 1125 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 DAB2IPQ5VWQ8 1189 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 WDR5BQ86VZ2 330 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 PROSER1Q86XN7 944 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 NPAS3Q8IXF0 933 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 EDEM2Q9BV94 578 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 KRT23Q9C075 422 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
SNRPF-204ENST00000552085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■■□ 22.8
SNRPF-204ENST00000552085 VPS45Q9NRW7 570 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 KANSL3Q9P2N6 904 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
SNRPF-204ENST00000552085 PRG3Q9Y2Y8 225 aaPredicted RBP14.09□□□□□ -0.15
SNRPF-204ENST00000552085 LOC400499M0QZD8 3231 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 SPDYE3A6NKU9 549 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 C4orf47A7E2U8 309 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
SNRPF-204ENST00000552085 KIF5BP33176 963 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 MPLP40238 635 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 AFF1P51825 1210 aaKnown RBP14.08□□□□□ -0.16
SNRPF-204ENST00000552085 NMIQ13287 307 aaPredicted RBP14.08□□□□□ -0.16
SNRPF-204ENST00000552085 UBE2SQ16763 222 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 KIAA1211LQ6NV74 962 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 AGMOQ6ZNB7 445 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 TRMT1LQ7Z2T5 733 aaKnown RBP14.08□□□□□ -0.16
SNRPF-204ENST00000552085 MBOAT7Q96N66 472 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 PSTPIP2Q9H939 334 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 CHST7Q9NS84 486 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 CACNA2D2Q9NY47 1150 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 PCDHA6Q9UN73 950 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 PCDHA8Q9Y5H6 950 aa14.08□□□□□ -0.16
SNRPF-204ENST00000552085 HYAL3O43820 417 aaPredicted RBP14.07□□□□□ -0.16
SNRPF-204ENST00000552085 POMCP01189 267 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 CSRP1P21291 193 aaKnown RBP14.07□□□□□ -0.16
SNRPF-204ENST00000552085 HOXA6P31267 233 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 OR1G1P47890 313 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 PPM1LQ5SGD2 360 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 MIS18BP1Q6P0N0 1132 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 KBTBD6Q86V97 674 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 GLIS3Q8NEA6 775 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 GAB3Q8WWW8 586 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 TCEAL3Q969E4 200 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 ELSPBP1Q96BH3 223 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 B3GALT6Q96L58 329 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 CNNM2Q9H8M5 875 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 POLIQ9UNA4 740 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 PIN4Q9Y237 131 aaKnown RBP14.07□□□□□ -0.16
SNRPF-204ENST00000552085 SALL3Q9BXA9 1300 aa14.07□□□□□ -0.16
SNRPF-204ENST00000552085 CCL16O15467 120 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 XYLBO75191 536 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 RPL17P18621 184 aaKnown RBP14.06□□□□□ -0.16
SNRPF-204ENST00000552085 HOXA9P31269 272 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 CREMQ03060 361 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 TROAPQ12815 778 aa14.06□□□□□ -0.16
SNRPF-204ENST00000552085 PTGDRQ13258 359 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms