RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 AP3B2Q13367 1082 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 TRAIPQ9BWF2 469 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 SPATC1LQ9H0A9 340 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 CYP39A1Q9NYL5 469 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 SYNPO2Q9UMS6 1093 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 MATR3P43243 847 aaKnown RBP eCLIP22.59■■□□□ 1.21
NPAS3-210ENST00000551492 ALDH5A1P51649 535 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-210ENST00000551492 PGM5Q15124 567 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 LBX2Q6XYB7 198 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 SMYD1Q8NB12 490 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 PPP1R13LQ8WUF5 828 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 MS4A4AQ96JQ5 239 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 CCDC43Q96MW1 224 aaKnown RBP22.59■■□□□ 1.21
NPAS3-210ENST00000551492 KCNMB3Q9NPA1 279 aa22.59■■□□□ 1.21
NPAS3-210ENST00000551492 ZMYND8Q9ULU4 1186 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-210ENST00000551492 PLA2G6O60733 806 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 FCER1AP12319 257 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 HSD17B4P51659 736 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 USP11P51784 963 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 BLOC1S4Q9NUP1 217 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 SCN4AP35499 1836 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 HNRNPRO43390 633 aaKnown RBP22.58■■□□□ 1.21
NPAS3-210ENST00000551492 CNMDO75829 334 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 ATP2A2P16615 1042 aaKnown RBP22.58■■□□□ 1.21
NPAS3-210ENST00000551492 PPIL2Q13356 520 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 LRRC41Q15345 812 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 TMEM266Q2M3C6 531 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 CCDC80Q76M96 950 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 CATSPER3Q86XQ3 398 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 TEX9Q8N6V9 391 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 PANX2Q96RD6 677 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 MED15Q96RN5 788 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 UBAP1Q9NZ09 502 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 ABT1Q9ULW3 272 aaKnown RBP22.58■■□□□ 1.21
NPAS3-210ENST00000551492 AGAP1Q9UPQ3 857 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 SAR1BQ9Y6B6 198 aa22.58■■□□□ 1.21
NPAS3-210ENST00000551492 PIK3CDO00329 1044 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 LSM1O15116 133 aaKnown RBP22.58■■□□□ 1.2
NPAS3-210ENST00000551492 NDUFB5O43674 189 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 SPATA31D3P0C874 917 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 ITGB3BPQ13352 177 aaPredicted RBP22.58■■□□□ 1.2
NPAS3-210ENST00000551492 SPATA31D4Q6ZUB0 917 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 SLC15A3Q8IY34 581 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 WHAMMQ8TF30 809 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 PDCD2LQ9BRP1 358 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 CPA4Q9UI42 421 aa22.58■■□□□ 1.2
NPAS3-210ENST00000551492 MCM3APO60318 1980 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 DOCK5Q9H7D0 1870 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 CCND1P24385 295 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 CLCN2P51788 898 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 SNAPC2Q13487 334 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 ZNF268Q14587 947 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-210ENST00000551492 EXOC3L1Q86VI1 746 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 ATP11CQ8NB49 1132 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 PXMP2Q9NR77 195 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 BARX2Q9UMQ3 279 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-210ENST00000551492 AGTPBP1Q9UPW5 1226 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 FAM237AA0A1B0GTK4 181 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 IPO5O00410 1097 aaKnown RBP22.57■■□□□ 1.2
NPAS3-210ENST00000551492 RGS20O76081 388 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 FOSP01100 380 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-210ENST00000551492 NR3C2P08235 984 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 SPIRE1Q08AE8 756 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 GJC2Q5T442 439 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-210ENST00000551492 KRT79Q5XKE5 535 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 ADAMTS5Q9UNA0 930 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 STK38LQ9Y2H1 464 aa22.57■■□□□ 1.2
NPAS3-210ENST00000551492 GAS7O60861 476 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 SMUG1Q53HV7 270 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 NEK9Q8TD19 979 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 DYDC2Q96IM9 177 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 TRAPPC3O43617 180 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 SNRNP27Q8WVK2 155 aaKnown RBP22.56■■□□□ 1.2
NPAS3-210ENST00000551492 FGFBP2Q9BYJ0 223 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 IKZF4Q9H2S9 585 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 ACAD9Q9H845 621 aa22.56■■□□□ 1.2
NPAS3-210ENST00000551492 TRIM49BA6NDI0 452 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 MYMKA6NI61 221 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 ALADP13716 330 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 ASIC1P78348 528 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 TSNAXIP1Q2TAA8 658 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 TKFCQ3LXA3 575 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 NANOGNBQ7Z5D8 188 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 KIF2BQ8N4N8 673 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 CTNNBL1Q8WYA6 563 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-210ENST00000551492 OXCT2Q9BYC2 517 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-210ENST00000551492 KCNH4Q9UQ05 1017 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 MRPS35P82673 323 aaKnown RBP22.55■■□□□ 1.2
NPAS3-210ENST00000551492 GGT7Q9UJ14 662 aa22.55■■□□□ 1.2
NPAS3-210ENST00000551492 CCT8L1PA6NM43 557 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 SP2Q02086 613 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 MTMR1Q13613 665 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 CCDC38Q502W7 563 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 ZNF280DQ6N043 979 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 NCCRP1Q6ZVX7 275 aaPredicted RBP22.54■■□□□ 1.2
NPAS3-210ENST00000551492 ZBTB8BQ8NAP8 495 aaPredicted RBP22.54■■□□□ 1.2
NPAS3-210ENST00000551492 MLKLQ8NB16 471 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 CALML4Q96GE6 196 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 WDR37Q9Y2I8 494 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms