RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MDGA1Q8NFP4 955 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
CCNT1-203ENST00000550457 E2F7Q96AV8 911 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 C16orf92Q96LL3 132 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 POLR3GLQ9BT43 218 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 POLR3BQ9NW08 1133 aaPredicted RBP4□□□□□ -1.77
CCNT1-203ENST00000550457 DNMBPQ6XZF7 1577 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 E9PCH4 1651 aa4□□□□□ -1.77
CCNT1-203ENST00000550457 POLA1P09884 1462 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 NLRP1Q9C000 1473 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 PIK3C2GO75747 1445 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 NUP160Q12769 1436 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 ARHGAP31Q2M1Z3 1444 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 NCOA3Q9Y6Q9 1424 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 UBA6A0AVT1 1052 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 GOLGA6L6A8MZA4 724 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 LMNAP02545 664 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 JUNP05412 331 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 CT47B1P0C2W7 299 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 FBLP22087 321 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 RBM25P49756 843 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 TMF1P82094 1093 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 HMGN5P82970 282 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 ARHGAP44Q17R89 818 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 FAM214AQ32MH5 1076 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 TTC38Q5R3I4 469 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 C20orf194Q5TEA3 1177 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 PRAMEF9Q5VWM5 478 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 KRT40Q6A162 431 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 MFSD5Q6N075 450 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 SMC5Q8IY18 1101 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 TANGO6Q9C0B7 1094 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 SLKQ9H2G2 1235 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 NCDNQ9UBB6 729 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 NOL7Q9UMY1 257 aaKnown RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 FZD1Q9UP38 647 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 HS3ST4Q9Y661 456 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 KDM5DQ9BY66 1539 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 ZNF608Q9ULD9 1512 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-203ENST00000550457 KDM6BO15054 1643 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 LAMC1P11047 1609 aa3.99□□□□□ -1.77
CCNT1-203ENST00000550457 KIF16BQ96L93 1317 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PTPRGP23470 1445 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 A0A0A6YYK5 440 aaPredicted RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 MFAP3LO75121 409 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 NUDT3O95989 172 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 CFBP00751 764 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 APPP05067 770 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ITGB1P05556 798 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ATP2B1P20020 1258 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 DDIT3P35638 169 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 KIR2DL3P43628 341 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 DMTNQ08495 405 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 SPIDRQ14159 915 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 KLHL40Q2TBA0 621 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ESRP1Q6NXG1 681 aaKnown RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ZCCHC8Q6NZY4 707 aaKnown RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 LRRC55Q6ZSA7 311 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 CMTM4Q8IZR5 234 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 KIAA1958Q8N8K9 716 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 CHST14Q8NCH0 376 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ZSWIM2Q8NEG5 633 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PROKR1Q8TCW9 393 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 THAP3Q8WTV1 239 aaPredicted RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ST8SIA2Q92186 375 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 CLUHP3Q96NS8 147 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 TUBGCP5Q96RT8 1024 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 SOX7Q9BT81 388 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 CCDC94Q9BW85 323 aaPredicted RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 C22orf23Q9BZE7 217 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PITHD1Q9GZP4 211 aaPredicted RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ZNF768Q9H5H4 540 aaKnown RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 C14orf93Q9H972 538 aaKnown RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 NCOA5Q9HCD5 579 aaKnown RBP3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ACSS2Q9NR19 701 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 SAMD15Q9P1V8 674 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PACSIN3Q9UKS6 424 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 SORCS3Q9UPU3 1222 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PTCH2Q9Y6C5 1203 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 ABCC2Q92887 1545 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 SHANK2Q9UPX8 1470 aa3.98□□□□□ -1.77
CCNT1-203ENST00000550457 PLXNC1O60486 1568 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 MAGI3Q5TCQ9 1506 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 NESP48681 1621 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 A0A0A6YYJ9 748 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 PTPDC1A2A3K4 754 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 IPO13O94829 963 aaKnown RBP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 LETM1O95202 739 aaPredicted RBP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 RAPGEF3O95398 923 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 ABHD16AO95870 558 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 HK1P19367 917 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 GTF2F1P35269 517 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCNT1-203ENST00000550457 NPEPPSP55786 919 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 RIPK4P57078 832 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 EPHA7Q15375 998 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 CCDC142Q17RM4 750 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 LY6G5CQ5SRR4 150 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 CREB3L3Q68CJ9 461 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 SASS6Q6UVJ0 657 aa3.97□□□□□ -1.77
CCNT1-203ENST00000550457 UNQ6494/PRO21346Q6UXR6 183 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms