RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-206ENST00000550406 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-206ENST00000550406 SCP2P22307 547 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 NFKBIBQ15653 356 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 BMT2Q1RMZ1 405 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 ATF7IP2Q5U623 682 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 ISM2Q6H9L7 571 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 NOTUMQ6P988 496 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 TMCO2Q7Z6W1 182 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-206ENST00000550406 HVCN1Q96D96 273 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 TRAIPQ9BWF2 469 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 MRPL4Q9BYD3 311 aaKnown RBP14.32□□□□□ -0.12
RAB5C-206ENST00000550406 NUP62CLQ9H1M0 184 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
RAB5C-206ENST00000550406 TNFSF13BQ9Y275 285 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 ZMYM2Q9UBW7 1377 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 CITO14578 2027 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 A0A0U1RQF3 1178 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 MEIS3P2A8K0S8 358 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 EIF3DO15371 548 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 TGFB1I1O43294 461 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 STRN3Q13033 797 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 MORC3Q14149 939 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 RBM43Q6ZSC3 357 aaKnown RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 FAM43BQ6ZT52 329 aaPredicted RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 SLC24A5Q71RS6 500 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 MRPL10Q7Z7H8 261 aaKnown RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 ZNF598Q86UK7 904 aaKnown RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 ECHDC2Q86YB7 292 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 SMYD4Q8IYR2 804 aaPredicted RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 SMG8Q8ND04 991 aaKnown RBP14.31□□□□□ -0.12
RAB5C-206ENST00000550406 TOP1MTQ969P6 601 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 ACCSQ96QU6 501 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 FAM105AQ9NUU6 356 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 RNF19AQ9NV58 838 aa14.31□□□□□ -0.12
RAB5C-206ENST00000550406 PDCD11Q14690 1871 aaKnown RBP14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 BIN1O00499 593 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 N4BP3O15049 544 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 EFCAB14O75071 495 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ZNF623O75123 536 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 NPTXRO95502 500 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ADSSP30520 456 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ALCAMQ13740 583 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ZNF658Q5TYW1 1059 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-206ENST00000550406 FAM109BQ6ICB4 259 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-206ENST00000550406 SLC27A1Q6PCB7 646 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ZPBP2Q6X784 338 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 NELFCDQ8IXH7 590 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 ZSWIM2Q8NEG5 633 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 CDT1Q9H211 546 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 C1orf112Q9NSG2 853 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 MAPK8IP1Q9UQF2 711 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 PCDHB2Q9Y5E7 798 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
RAB5C-206ENST00000550406 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
RAB5C-206ENST00000550406 TOM1L1O75674 476 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 ABCD1P33897 745 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 PRCPP42785 496 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 NCBP1Q09161 790 aaKnown RBP14.29□□□□□ -0.12
RAB5C-206ENST00000550406 KLHL40Q2TBA0 621 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 CEP120Q8N960 986 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 LPPQ93052 612 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
RAB5C-206ENST00000550406 RNPC3Q96LT9 517 aaKnown RBP14.29□□□□□ -0.12
RAB5C-206ENST00000550406 KCTD10Q9H3F6 313 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 COLQQ9Y215 455 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-206ENST00000550406 HES2Q9Y543 173 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 IPPQ9Y573 584 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 UBE4BO95155 1302 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
RAB5C-206ENST00000550406 A0A0B4J269 797 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 HNRNPDLO14979 420 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 MEFVO15553 781 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 FAM189A1O60320 539 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 UPP2O95045 317 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 IBSPP21815 317 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 LIG4P49917 911 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 GATMP50440 423 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 MCL1Q07820 350 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 COBLL1Q53SF7 1204 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 CCDC183Q5T5S1 534 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 PRPF38BQ5VTL8 546 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 AGMOQ6ZNB7 445 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms