RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	GPBP1	Q86WP2	473 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CDR2L	Q86X02	465 aa	Predicted RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LINC00301	Q8NCQ3	95 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SPIRE2	Q8WWL2	714 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LARP4B	Q92615	738 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SYMPK	Q92797	1274 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	HLA-C	Q95604	372 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PPP2R3C	Q969Q6	453 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	EPSTI1	Q96J88	318 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CLIC6	Q96NY7	704 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ADPGK	Q9BRR6	497 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NXF3	Q9H4D5	531 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PDZD7	Q9H5P4	517 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	BLOC1S4	Q9NUP1	217 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SPG21	Q9NZD8	308 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ARHGAP28	Q9P2N2	729 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KANSL3	Q9P2N6	904 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CCDC39	Q9UFE4	941 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ODF2L	Q9ULJ1	636 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LZTS1	Q9Y250	596 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	GIT1	Q9Y2X7	761 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	HES2	Q9Y543	173 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	COL6A3	P12111	3177 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SPTLC2	O15270	562 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	INPPL1	O15357	1258 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PPP6R2	O75170	966 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CSPG5	O95196	566 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	YEATS4	O95619	227 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PBX3	P40426	434 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SMTN	P53814	917 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	BCAR1	P56945	870 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PKP1	Q13835	747 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CAMK1	Q14012	370 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MCM6	Q14566	821 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ARSH	Q5FYA8	562 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	USP49	Q70CQ1	688 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SLC39A11	Q8N1S5	342 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LRRC15	Q8TF66	581 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MRPS27	Q92552	414 aa	Known RBP	13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	APOL6	Q9BWW8	343 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RNF39	Q9H2S5	420 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TMEM134	Q9H6X4	195 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TLR9	Q9NR96	1032 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LARS	Q9P2J5	1176 aa	Known RBP	13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	STK17A	Q9UEE5	414 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PUF60	Q9UHX1	559 aa	Known RBP	13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ZMYM2	Q9UBW7	1377 aa		13.15	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ARL5C	A6NH57	179 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TTLL13P	A6NNM8	815 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SFI1	A8K8P3	1242 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188		H0YCG3	227 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SLC16A4	O15374	487 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NCK2	O43639	380 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	EDN1	P05305	212 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KRT18	P05783	430 aa	Known RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MLH1	P40692	756 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DHX8	Q14562	1220 aa	Known RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DCAF4L1	Q3SXM0	396 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TJAP1	Q5JTD0	557 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ATF7IP2	Q5U623	682 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	RRAGB	Q5VZM2	374 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PDE12	Q6L8Q7	609 aa	Known RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FAM193B	Q96PV7	902 aa	Predicted RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ASB2	Q96Q27	587 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GAD1	Q99259	594 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	REEP2	Q9BRK0	252 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NTPCR	Q9BSD7	190 aa	Known RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GBP3	Q9H0R5	595 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NRDE2	Q9H7Z3	1164 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	UBE2Z	Q9H832	354 aa	Predicted RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TFIP11	Q9UBB9	837 aa	Known RBP	13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZDHHC9	Q9Y397	364 aa		13.14	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TBCA	O75347	108 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FAM13A	O94988	1023 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	POMC	P01189	267 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SCP2	P22307	547 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	AKAP5	P24588	427 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	IRS1	P35568	1242 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	AFF1	P51825	1210 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CACNB1	Q02641	598 aa	Predicted RBP	13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TFF2	Q03403	129 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	STRN3	Q13033	797 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	COL19A1	Q14993	1142 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	NT5DC1	Q5TFE4	455 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CCDC73	Q6ZRK6	1079 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZNF280B	Q86YH2	543 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TMEM161B	Q8NDZ6	487 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	KCNG4	Q8TDN1	519 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MICAL1	Q8TDZ2	1067 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PABPC5	Q96DU9	382 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TMEM169	Q96HH4	297 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZFP42	Q96MM3	310 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TMEM175	Q9BSA9	504 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	MRPL4	Q9BYD3	311 aa	Known RBP	13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PARVG	Q9HBI0	331 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DNAJB4	Q9UDY4	337 aa		13.13	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PARP2	Q9UGN5	583 aa		13.13	□□□□□ -0.31

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