RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MRPS27Q92552 414 aaKnown RBP21.29■■□□□ 1
DDX54-207ENST00000550016 KCNN1Q92952 543 aa21.29■■□□□ 1
DDX54-207ENST00000550016 MRPL4Q9BYD3 311 aaKnown RBP21.29■■□□□ 1
DDX54-207ENST00000550016 TRIM6Q9C030 488 aaPredicted RBP21.29■■□□□ 1
DDX54-207ENST00000550016 TMEM117Q9H0C3 514 aa21.29■■□□□ 1
DDX54-207ENST00000550016 PDZD7Q9H5P4 517 aa21.29■■□□□ 1
DDX54-207ENST00000550016 MTMR10Q9NXD2 777 aa21.29■■□□□ 1
DDX54-207ENST00000550016 SERTAD1Q9UHV2 236 aa21.29■■□□□ 1
DDX54-207ENST00000550016 NPTXRO95502 500 aa21.28■■□□□ 1
DDX54-207ENST00000550016 IDEP14735 1019 aa21.28■■□□□ 1
DDX54-207ENST00000550016 ABCD1P33897 745 aa21.28■■□□□ 1
DDX54-207ENST00000550016 SYKP43405 635 aa21.28■■□□□ 1
DDX54-207ENST00000550016 NDUFA8P51970 172 aa21.28■■□□□ 1
DDX54-207ENST00000550016 GRIN2CQ14957 1233 aa21.28■■□□□ 1
DDX54-207ENST00000550016 LONRF3Q496Y0 759 aa21.28■■□□□ 1
DDX54-207ENST00000550016 CLLU1OSQ5K130 101 aa21.28■■□□□ 1
DDX54-207ENST00000550016 ATF7IP2Q5U623 682 aa21.28■■□□□ 1
DDX54-207ENST00000550016 CNNM4Q6P4Q7 775 aa21.28■■□□□ 1
DDX54-207ENST00000550016 CCDC65Q8IXS2 484 aa21.28■■□□□ 1
DDX54-207ENST00000550016 ABI1Q8IZP0 508 aa21.28■■□□□ 1
DDX54-207ENST00000550016 SMG8Q8ND04 991 aaKnown RBP21.28■■□□□ 1
DDX54-207ENST00000550016 LPPQ93052 612 aa21.28■■□□□ 1
DDX54-207ENST00000550016 SAMD11Q96NU1 681 aa21.28■■□□□ 1
DDX54-207ENST00000550016 CASD1Q96PB1 797 aa21.28■■□□□ 1
DDX54-207ENST00000550016 ACO2Q99798 780 aaKnown RBP21.28■■□□□ 1
DDX54-207ENST00000550016 C7orf25Q9BPX7 421 aa21.28■■□□□ 1
DDX54-207ENST00000550016 ADPGKQ9BRR6 497 aa21.28■■□□□ 1
DDX54-207ENST00000550016 TRIM9Q9C026 710 aa21.28■■□□□ 1
DDX54-207ENST00000550016 PANK4Q9NVE7 773 aa21.28■■□□□ 1
DDX54-207ENST00000550016 IPPQ9Y573 584 aa21.28■■□□□ 1
DDX54-207ENST00000550016 CITO14578 2027 aa21.28■■□□□ 1
DDX54-207ENST00000550016 FRMD3A2A2Y4 597 aa21.27■■□□□ 1
DDX54-207ENST00000550016 K7ENM7 598 aa21.27■■□□□ 1
DDX54-207ENST00000550016 ACTN4O43707 911 aaKnown RBP21.27■■□□□ 1
DDX54-207ENST00000550016 ITGA4P13612 1032 aa21.27■■□□□ 1
DDX54-207ENST00000550016 CSPP1Q1MSJ5 1256 aa21.27■■□□□ 1
DDX54-207ENST00000550016 AGMOQ6ZNB7 445 aa21.27■■□□□ 1
DDX54-207ENST00000550016 APBB1IPQ7Z5R6 666 aaPredicted RBP21.27■■□□□ 1
DDX54-207ENST00000550016 SPRED2Q7Z698 418 aa21.27■■□□□ 1
DDX54-207ENST00000550016 SFR1Q86XK3 245 aa21.27■■□□□ 1
DDX54-207ENST00000550016 HACE1Q8IYU2 909 aa21.27■■□□□ 1
DDX54-207ENST00000550016 HELQQ8TDG4 1101 aa21.27■■□□□ 1
DDX54-207ENST00000550016 RSPH1Q8WYR4 309 aa21.27■■□□□ 1
DDX54-207ENST00000550016 CLP1Q92989 425 aaKnown RBP21.27■■□□□ 1
DDX54-207ENST00000550016 FIZ1Q96SL8 496 aa21.27■■□□□ 1
DDX54-207ENST00000550016 CERS4Q9HA82 394 aa21.27■■□□□ 1
DDX54-207ENST00000550016 TNFSF13BQ9Y275 285 aa21.27■■□□□ 1
DDX54-207ENST00000550016 MEIS3P2A8K0S8 358 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 NMT1P30419 496 aaKnown RBP21.26■□□□□ 0.99
DDX54-207ENST00000550016 AFMP43652 599 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 HERC4Q5GLZ8 1057 aaPredicted RBP21.26■□□□□ 0.99
DDX54-207ENST00000550016 EEF1DP3Q658K8 133 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 GLB1LQ6UWU2 654 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 ARNTL2Q8WYA1 636 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 C17orf80Q9BSJ5 609 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 TARS2Q9BW92 718 aaKnown RBP21.26■□□□□ 0.99
DDX54-207ENST00000550016 GOLPH3LQ9H4A5 285 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 ST6GALNAC4Q9H4F1 302 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 UBN1Q9NPG3 1134 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 TBX20Q9UMR3 447 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 RWDD3Q9Y3V2 267 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 MRPL42Q9Y6G3 142 aaKnown RBP21.26■□□□□ 0.99
DDX54-207ENST00000550016 SZT2Q5T011 3432 aa21.26■□□□□ 0.99
DDX54-207ENST00000550016 OFD1O75665 1012 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 ASIC1P78348 528 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 GTF2BQ00403 316 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 DCAF4L1Q3SXM0 396 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 ZPBP2Q6X784 338 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 ZNF720Q7Z2F6 126 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 TMEM192Q8IY95 271 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 RNF39Q9H2S5 420 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
DDX54-207ENST00000550016 PRDM12Q9H4Q4 367 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 MRPL44Q9H9J2 332 aaKnown RBP21.25■□□□□ 0.99
DDX54-207ENST00000550016 RSAD1Q9HA92 442 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 OLFML3Q9NRN5 406 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 MTUS1Q9ULD2 1270 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 HES2Q9Y543 173 aa21.25■□□□□ 0.99
DDX54-207ENST00000550016 COL4A4P53420 1690 aaPredicted RBP21.24■□□□□ 0.99
DDX54-207ENST00000550016 LINC00271P0C7V0 271 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 BMPR1AP36894 532 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 EPC2Q52LR7 807 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 NOMO2Q5JPE7 1267 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 PAGE5Q96GU1 130 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 GUCD1Q96NT3 240 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 CDX2Q99626 313 aaPredicted RBP21.24■□□□□ 0.99
DDX54-207ENST00000550016 MRPL9Q9BYD2 267 aaKnown RBP21.24■□□□□ 0.99
DDX54-207ENST00000550016 PTPRHQ9HD43 1115 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 TYW1Q9NV66 732 aaKnown RBP21.24■□□□□ 0.99
DDX54-207ENST00000550016 TBC1D7Q9P0N9 293 aa21.24■□□□□ 0.99
DDX54-207ENST00000550016 CHD7Q9P2D1 2997 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.23■□□□□ 0.99
DDX54-207ENST00000550016 ZNF202O95125 648 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 PROZP22891 400 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 COASYQ13057 564 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 ZC2HC1CQ53FD0 456 aaPredicted RBP21.23■□□□□ 0.99
DDX54-207ENST00000550016 SPOUT1Q5T280 376 aaKnown RBP21.23■□□□□ 0.99
DDX54-207ENST00000550016 LRRC55Q6ZSA7 311 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 GRAMD1CQ8IYS0 662 aa21.23■□□□□ 0.99
DDX54-207ENST00000550016 LRRC43Q8N309 656 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms