RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 DNAJC19Q96DA6 116 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 BICD1Q96G01 975 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 FAM161BQ96MY7 647 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 C7orf25Q9BPX7 421 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 MRPL9Q9BYD2 267 aaKnown RBP16.43■□□□□ 0.22
GPN3-206ENST00000549963 MRPL44Q9H9J2 332 aaKnown RBP16.43■□□□□ 0.22
GPN3-206ENST00000549963 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 SERTAD1Q9UHV2 236 aa16.43■□□□□ 0.22
GPN3-206ENST00000549963 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
GPN3-206ENST00000549963 FNDC1Q4ZHG4 1894 aaPredicted RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 CARNS1A5YM72 827 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 NPTXRO95502 500 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 MYL1P05976 194 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 FGFR1P11362 822 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.22
GPN3-206ENST00000549963 AFMP43652 599 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 NDUFA8P51970 172 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 ERVK-21P61565 698 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 ASIC1P78348 528 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 ALCAMQ13740 583 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 UBXN11Q5T124 520 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 CNNM4Q6P4Q7 775 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 GAS2L1Q99501 681 aaPredicted RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 ACO2Q99798 780 aaKnown RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 EIF2AQ9BY44 585 aaKnown RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 TRIM9Q9C026 710 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 TTYH1Q9H313 450 aaPredicted RBP16.42■□□□□ 0.22
GPN3-206ENST00000549963 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 EXOC7Q9UPT5 735 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 HPSEQ9Y251 543 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 IPPQ9Y573 584 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 PCDHB13Q9Y5F0 798 aa16.42■□□□□ 0.22
GPN3-206ENST00000549963 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 RB1P06400 928 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 RNASELQ05823 741 aaKnown RBP16.41■□□□□ 0.22
GPN3-206ENST00000549963 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 NT5DC1Q5TFE4 455 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 Q7L0L9 218 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 ZNF720Q7Z2F6 126 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 TMEM192Q8IY95 271 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 FBXO22Q8NEZ5 403 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 ARNTL2Q8WYA1 636 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 KCNN1Q92952 543 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 HVCN1Q96D96 273 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 FAM193BQ96PV7 902 aaPredicted RBP16.41■□□□□ 0.22
GPN3-206ENST00000549963 ST6GALNAC4Q9H4F1 302 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 PARP2Q9UGN5 583 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 GIT1Q9Y2X7 761 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 PCDHB12Q9Y5F1 795 aa16.41■□□□□ 0.22
GPN3-206ENST00000549963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 PVALEFA0A1B0GWK0 134 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 CLDN3O15551 220 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 TOM1L1O75674 476 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 ZNF202O95125 648 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 ATF7P17544 494 aaPredicted RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 NMT1P30419 496 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 BMPR1AP36894 532 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 LIG4P49917 911 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 GTF2BQ00403 316 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 GRIN2CQ14957 1233 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 CDR2LQ86X02 465 aaPredicted RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 LRRC43Q8N309 656 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 SMG8Q8ND04 991 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 LPPQ93052 612 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 TARS2Q9BW92 718 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 CERS4Q9HA82 394 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 RC3H2Q9HBD1 1191 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 MTMR10Q9NXD2 777 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 HOOK1Q9UJC3 728 aaKnown RBP16.4■□□□□ 0.22
GPN3-206ENST00000549963 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
GPN3-206ENST00000549963 RALGAPA2Q2PPJ7 1873 aa16.39■□□□□ 0.22
GPN3-206ENST00000549963 NLRC5Q86WI3 1866 aa16.39■□□□□ 0.22
GPN3-206ENST00000549963 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 HNRNPDLO14979 420 aaKnown RBP16.39■□□□□ 0.21
GPN3-206ENST00000549963 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
GPN3-206ENST00000549963 OFD1O75665 1012 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 GCNT3O95395 438 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 LAG3P18627 525 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 CTNNB1P35222 781 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 GATMP50440 423 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 YARSP54577 528 aaKnown RBP16.39■□□□□ 0.21
GPN3-206ENST00000549963 KYAT1Q16773 422 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 ZNF568Q3ZCX4 644 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 EPC2Q52LR7 807 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
GPN3-206ENST00000549963 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms