RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 COX4I2Q96KJ9 171 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 RNPC3Q96LT9 517 aaKnown RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 CCDC42Q96M95 316 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 CCDC43Q96MW1 224 aaKnown RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 NOX5Q96PH1 765 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 CCT8L2Q96SF2 557 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 LRRC1Q9BTT6 524 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 PHF20Q9BVI0 1012 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 NOC4LQ9BVI4 516 aaKnown RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 IFIH1Q9BYX4 1025 aaKnown RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 ZC3H12CQ9C0D7 883 aaKnown RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 NAPBQ9H115 298 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 NHEJ1Q9H9Q4 299 aaPredicted RBP4.15□□□□□ -1.75
RAB5B-207ENST00000549915 TMBIM4Q9HC24 238 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 CABP5Q9NP86 173 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 DISC1Q9NRI5 854 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 TRIM10Q9UDY6 481 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 GTF2IRD1Q9UHL9 959 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 SLC12A6Q9UHW9 1150 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 PLAGL2Q9UPG8 496 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 SNCAIPQ9Y6H5 919 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 DOCK2Q92608 1830 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 ALS2Q96Q42 1657 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 CHD4Q14839 1912 aa4.15□□□□□ -1.75
RAB5B-207ENST00000549915 TNS3Q68CZ2 1445 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TCRBV5S4A2TA0A5A2 114 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 KLHL33A6NCF5 533 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ZNF233A6NK53 670 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 BTNL10A8MVZ5 291 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 E7EVH7 732 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CCDC188H7C350 402 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PAX4O43316 350 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 MGRN1O60291 552 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 SRGAP2O75044 1071 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 RTN2O75298 545 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 HEXIM1O94992 359 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PCCAP05165 728 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 MYBP10242 640 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PDE6AP16499 860 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ANXA13P27216 316 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CALML3P27482 149 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CDC25AP30304 524 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 GBP2P32456 591 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PRPHP41219 470 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 STAT6P42226 847 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PRCPP42785 496 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 KIF11P52732 1056 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 HDLBPQ00341 1268 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 MAP3K12Q12852 859 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 GRIK3Q13003 919 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 IFT88Q13099 833 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PSMD2Q13200 908 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ORC2Q13416 577 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PWP1Q13610 501 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ITIH4Q14624 930 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TTLL4Q14679 1199 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 SEPT2Q15019 361 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CCDC85BQ15834 202 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CLUL1Q15846 466 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PPP2R5EQ16537 467 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CDC37Q16543 378 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 IFI16Q16666 785 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 LRRC24Q50LG9 513 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 GKAP1Q5VSY0 366 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 MFSD6Q6ZSS7 791 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 USP49Q70CQ1 688 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 HOOK3Q86VS8 718 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 THEMISQ8N1K5 641 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ANKS4BQ8N8V4 417 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 FANCBQ8NB91 859 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TCP11Q8WWU5 503 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ESR2Q92731 530 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 SYN2Q92777 582 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 GATA6Q92908 595 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 LRRC59Q96AG4 307 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 RRP36Q96EU6 259 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CRELD1Q96HD1 420 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 EPSTI1Q96J88 318 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 AK8Q96MA6 479 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 STRBPQ96SI9 672 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PLCD4Q9BRC7 762 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TUBGCP2Q9BSJ2 902 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 UBAC1Q9BSL1 405 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ISCA1Q9BUE6 129 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CCSER1Q9C0I3 900 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 NSRP1Q9H0G5 558 aaKnown RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ISCUQ9H1K1 167 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TAF1DQ9H5J8 278 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-207ENST00000549915 EBF2Q9HAK2 575 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CD248Q9HCU0 757 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 C1GALT1Q9NS00 363 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 ANAPC4Q9UJX5 808 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 KCNJ14Q9UNX9 436 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 PCDHA13Q9Y5I0 950 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 CAPN6Q9Y6Q1 641 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 MYH13Q9UKX3 1938 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 DLEC1Q9Y238 1755 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 DUOX1Q9NRD9 1551 aa4.14□□□□□ -1.75
RAB5B-207ENST00000549915 TNS2Q63HR2 1409 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms