RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 CPB1P15086 417 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 RAG1P15918 1043 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 MYBPC2Q14324 1141 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 PCSK1P29120 753 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 ACOT2P49753 483 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 ALKBH5Q6P6C2 394 aaKnown RBP12.53□□□□□ -0.4
VDR-206ENST00000549336 SCN4BQ8IWT1 228 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 APPL2Q8NEU8 664 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
VDR-206ENST00000549336 AXLP30530 894 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 GBP1P32455 592 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 RARRES1P49788 294 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 KRT17Q04695 432 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 ASIC3Q9UHC3 531 aa12.53□□□□□ -0.4
VDR-206ENST00000549336 TLR2O60603 784 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 SLURP2P0DP57 97 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 MYBP10242 640 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.4
VDR-206ENST00000549336 LGALS2P05162 132 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 TRIM49P0CI25 452 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 TRIM49CP0CI26 452 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.41
VDR-206ENST00000549336 NPTX2P47972 431 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 LONRF2Q1L5Z9 754 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 MPZL3Q6UWV2 235 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 CYP2W1Q8TAV3 490 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 RSAD2Q8WXG1 361 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 SETD4Q9NVD3 440 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 ADAM22Q9P0K1 906 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
VDR-206ENST00000549336 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 KCNA3P22001 575 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 EIF4A3P38919 411 aaKnown RBP12.52□□□□□ -0.41
VDR-206ENST00000549336 LMNB2Q03252 620 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 NCOA4Q13772 614 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 MESDQ14696 234 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 SGO2Q562F6 1265 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 NME8Q8N427 588 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
VDR-206ENST00000549336 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 ZNF286BP0CG31 522 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 GRK4P32298 578 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
VDR-206ENST00000549336 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
VDR-206ENST00000549336 PLPPR4Q7Z2D5 763 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 DPF3Q92784 378 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 RAB17Q9H0T7 212 aa12.52□□□□□ -0.41
VDR-206ENST00000549336 BAZ2BQ9UIF8 2168 aaKnown RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 MFAP3LO75121 409 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 UPP2O95045 317 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 NPTXRO95502 500 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 MAN1A1P33908 653 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 ZNF394Q53GI3 561 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 DNAJC18Q9H819 358 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 ZNF112Q9UJU3 913 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 KCNK3O14649 394 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 ALDH7A1P49419 539 aaKnown RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 KIZQ2M2Z5 673 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 KANSL3Q9P2N6 904 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 SLITRK3O94933 977 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 TBC1D8O95759 1140 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 APLP1P51693 650 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 GIT2Q14161 759 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 ZC2HC1CQ53FD0 456 aaPredicted RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 TMEM169Q96HH4 297 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 INPP4AQ96PE3 977 aaPredicted RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
VDR-206ENST00000549336 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
VDR-206ENST00000549336 TMEM39AQ9NV64 488 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms