RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 TRIT1Q9H3H1 467 aaKnown RBP4.53□□□□□ -1.68
APAF1-208ENST00000549007 MAN1C1Q9NR34 630 aa4.53□□□□□ -1.68
APAF1-208ENST00000549007 USP42Q9H9J4 1324 aaKnown RBP4.53□□□□□ -1.68
APAF1-208ENST00000549007 MMEP08473 750 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 LSP1P33241 339 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 TUBB8Q3ZCM7 444 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 TBC1D9BQ66K14 1250 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 MIER2Q8N344 545 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 ZNF775Q96BV0 537 aaPredicted RBP4.52□□□□□ -1.69
APAF1-208ENST00000549007 NT5C1BQ96P26 610 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 MYD88Q99836 296 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 DMRT3Q9NQL9 472 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 DPP7Q9UHL4 492 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 MAP3K2Q9Y2U5 619 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 ADCY9O60503 1353 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 NPHS1O60500 1241 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 ALDH2P05091 517 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 MMP10P09238 476 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 SLC5A1P13866 664 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 SDHBP21912 280 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 DDR1Q08345 913 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 GTF2H3Q13889 308 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 C20orf194Q5TEA3 1177 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 OVCH2Q7RTZ1 564 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 PLEKHO2Q8TD55 490 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 HHIPL1Q96JK4 782 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 PRDM7Q9NQW5 492 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 SEMA3GQ9NS98 782 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 HYPKQ9NX55 129 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 IMPACTQ9P2X3 320 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 STOML1Q9UBI4 398 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 NARFQ9UHQ1 456 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 MAP3K15Q6ZN16 1313 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 C4AP0C0L4 1744 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 ECE1P42892 770 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 STK3Q13188 491 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 NFIXQ14938 502 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 UVSSAQ2YD98 709 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 CYP27C1Q4G0S4 372 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 GIMAP7Q8NHV1 300 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 PANK1Q8TE04 598 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.52□□□□□ -1.69
APAF1-208ENST00000549007 TP53INP1Q96A56 240 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 STRBPQ96SI9 672 aaKnown RBP4.52□□□□□ -1.69
APAF1-208ENST00000549007 FAM83CQ9BQN1 747 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 RBPJLQ9UBG7 517 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
APAF1-208ENST00000549007 POLHQ9Y253 713 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 UBN2Q6ZU65 1347 aa4.52□□□□□ -1.69
APAF1-208ENST00000549007 TRIM75PA6NK02 468 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 C9orf172C9J069 976 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 OFD1O75665 1012 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 WDHD1O75717 1129 aaPredicted RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 DGKIO75912 1065 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 PTPN1P18031 435 aaKnown RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 RHCEP18577 417 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 AGXTP21549 392 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 RHDQ02161 417 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 TRIM25Q14258 630 aaKnown RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 KIAA0753Q2KHM9 967 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 CXorf67Q86X51 503 aaPredicted RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 DPF2Q92785 391 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 TBCBQ99426 244 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 BCAS3Q9H6U6 928 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 CICQ96RK0 1608 aaPredicted RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 ZNF831Q5JPB2 1677 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 NRDCO43847 1150 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 ENPP1P22413 925 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 SPIRE1Q08AE8 756 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 ARHGAP44Q17R89 818 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 RALGPS1Q5JS13 557 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 GPR158Q5T848 1215 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 SWSAP1Q6NVH7 229 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 CEP128Q6ZU80 1094 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 AIFM3Q96NN9 605 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 PLCD4Q9BRC7 762 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 MYL10Q9BUA6 226 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 BHMT2Q9H2M3 363 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 LIMCH1Q9UPQ0 1083 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 GPR45Q9Y5Y3 372 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 B3GALT1Q9Y5Z6 326 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 NPHP1O15259 732 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 HSPA6P17066 643 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 PHC1P78364 1004 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 CHAF1AQ13111 956 aaPredicted RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 CLEC10AQ8IUN9 316 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 PLBD2Q8NHP8 589 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 DNAAF4Q8WXU2 420 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 COX4I2Q96KJ9 171 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.51□□□□□ -1.69
APAF1-208ENST00000549007 RNF38Q9H0F5 515 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 ATP23Q9Y6H3 246 aa4.51□□□□□ -1.69
APAF1-208ENST00000549007 CARMIL3Q8ND23 1372 aa4.5□□□□□ -1.69
APAF1-208ENST00000549007 IGKV5-2P06315 115 aa4.5□□□□□ -1.69
APAF1-208ENST00000549007 MC4RP32245 332 aa4.5□□□□□ -1.69
APAF1-208ENST00000549007 MANFP55145 182 aaKnown RBP4.5□□□□□ -1.69
APAF1-208ENST00000549007 FSCN1Q16658 493 aaKnown RBP4.5□□□□□ -1.69
APAF1-208ENST00000549007 ALDH1L2Q3SY69 923 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms