RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SLMAPQ14BN4 828 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 CLUL1Q15846 466 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 MFSD5Q6N075 450 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 CPNE8Q86YQ8 564 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 UBL4BQ8N7F7 174 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 CRYGNQ8WXF5 182 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 DDX4Q9NQI0 724 aaKnown RBP14.77□□□□□ -0.05
HDAC7-228ENST00000548938 RGL1Q9NZL6 768 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 LTBP1Q14766 1721 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 FOXN3O00409 490 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 DIAPH2O60879 1101 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ACSL3O95573 720 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 HSPA6P17066 643 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 GBP1P32455 592 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ZKSCAN8Q15776 578 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 NUGGCQ68CJ6 796 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 C11orf63Q6NUN7 778 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ZNF746Q6NUN9 644 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 RHOT2Q8IXI1 618 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 CCDC105Q8IYK2 499 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ART4Q93070 314 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 KLHL29Q96CT2 875 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 CAMKK2Q96RR4 588 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 OLFML3Q9NRN5 406 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 HOMER3Q9NSC5 361 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 TRIM33Q9UPN9 1127 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 RABGAP1Q9Y3P9 1069 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 LRRC37AA6NMS7 1700 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 MIF4GDA9UHW6 222 aaKnown RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 HGSO14964 777 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 SUN1O94901 812 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 PYGMP11217 842 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 COMTP21964 271 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ALDH1B1P30837 517 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ZNF131P52739 623 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 COPS2P61201 443 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 MYL7Q01449 175 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 BNIP1Q12981 228 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 KIF22Q14807 665 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 PHLDB3Q6NSJ2 640 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 BZW1Q7L1Q6 419 aaKnown RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ANKRD42Q8N9B4 389 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 PIGOQ8TEQ8 1089 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 ARHGEF2Q92974 986 aaKnown RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 MASTLQ96GX5 879 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 AGPAT1Q99943 283 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 CDC42EP4Q9H3Q1 356 aaKnown RBP14.76□□□□□ -0.05
HDAC7-228ENST00000548938 CTNNAL1Q9UBT7 734 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 STK38LQ9Y2H1 464 aa14.76□□□□□ -0.05
HDAC7-228ENST00000548938 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SHMT1P34896 483 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SNAP25P60880 206 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 MESDQ14696 234 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SLC15A2Q16348 729 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SEL1L2Q5TEA6 688 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 RINT1Q6NUQ1 792 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SLC30A10Q6XR72 485 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 MYCT1Q8N699 235 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 POP1Q99575 1024 aaKnown RBP14.75□□□□□ -0.05
HDAC7-228ENST00000548938 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 VAV3Q9UKW4 847 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 EML1O00423 815 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 ATMINO43313 823 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-228ENST00000548938 FAM13AO94988 1023 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 GH1P01241 217 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 TAL1P17542 331 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-228ENST00000548938 COILP38432 576 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-228ENST00000548938 PEX5P50542 639 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 LLGL1Q15334 1064 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 MOXD1Q6UVY6 613 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 ERICH1Q86X53 443 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 GDAP1Q8TB36 358 aa14.75□□□□□ -0.05
HDAC7-228ENST00000548938 MSH4O15457 936 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 EYA4O95677 639 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 HADHBP55084 474 aaKnown RBP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 GTF2IP78347 998 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 FITM2Q8N6M3 262 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 CYP2W1Q8TAV3 490 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 ZNF622Q969S3 477 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 RMDN2Q96LZ7 410 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 EIF2AK1Q9BQI3 630 aaKnown RBP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 GLT8D2Q9H1C3 349 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 EIF3DO15371 548 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 MAP2K1Q02750 393 aaPredicted RBP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 RRP1BQ14684 758 aaKnown RBP14.74□□□□□ -0.05
HDAC7-228ENST00000548938 Q4G0T1 1027 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 SPATA21Q7Z572 469 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 SLF2Q8IX21 1173 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 RUNDC3BQ96NL0 473 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 COA1Q9GZY4 146 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 PASKQ96RG2 1323 aa14.74□□□□□ -0.05
HDAC7-228ENST00000548938 TBX3O15119 743 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 GAP43P17677 238 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 AP3B2Q13367 1082 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms