RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 UBXN11Q5T124 520 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 ATF7IP2Q5U623 682 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 EEF1DP3Q658K8 133 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
CACNB3-210ENST00000548874 SYAP1Q96A49 352 aaPredicted RBP23.13■■□□□ 1.29
CACNB3-210ENST00000548874 TMEM206Q9H813 350 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 EXOC7Q9UPT5 735 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 MICAL3Q7RTP6 2002 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.12■■□□□ 1.29
CACNB3-210ENST00000548874 BIN1O00499 593 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 ENPP3O14638 875 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 N4BP3O15049 544 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 CEP290O15078 2479 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 EFCAB14O75071 495 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 TOM1L1O75674 476 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 SLC39A4Q6P5W5 647 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 OTOP2Q7RTS6 562 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 SMYD4Q8IYR2 804 aaPredicted RBP23.12■■□□□ 1.29
CACNB3-210ENST00000548874 MYOCDQ8IZQ8 938 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 GUF1Q8N442 669 aaKnown RBP23.12■■□□□ 1.29
CACNB3-210ENST00000548874 HERVK_113Q902F9 699 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 IKZF4Q9H2S9 585 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 C1orf112Q9NSG2 853 aa23.12■■□□□ 1.29
CACNB3-210ENST00000548874 C9IYK1 514 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 HNRNPDLO14979 420 aaKnown RBP23.11■■□□□ 1.29
CACNB3-210ENST00000548874 LIG4P49917 911 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 FAM189BP81408 668 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 RASIP1Q5U651 963 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 ISM2Q6H9L7 571 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 TWF2Q6IBS0 349 aaKnown RBP23.11■■□□□ 1.29
CACNB3-210ENST00000548874 SLC27A1Q6PCB7 646 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 SLC24A5Q71RS6 500 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 CDR2LQ86X02 465 aaPredicted RBP23.11■■□□□ 1.29
CACNB3-210ENST00000548874 BICD1Q96G01 975 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 STYXL1Q9Y6J8 313 aa23.11■■□□□ 1.29
CACNB3-210ENST00000548874 ANKRD63C9JTQ0 380 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 KIF20AO95235 890 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 BMP8BP34820 402 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 PRCPP42785 496 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 WDR5P61964 334 aaKnown RBP23.1■■□□□ 1.29
CACNB3-210ENST00000548874 KNOP1Q1ED39 458 aaKnown RBP23.1■■□□□ 1.29
CACNB3-210ENST00000548874 TMEM132AQ24JP5 1023 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 MPZL3Q6UWV2 235 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 NELFCDQ8IXH7 590 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 ZBTB45Q96K62 511 aaPredicted RBP23.1■■□□□ 1.29
CACNB3-210ENST00000548874 EIF2AQ9BY44 585 aaKnown RBP23.1■■□□□ 1.29
CACNB3-210ENST00000548874 FAM105AQ9NUU6 356 aa23.1■■□□□ 1.29
CACNB3-210ENST00000548874 A0A0U1RQF3 1178 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 TISP43B9A030 160 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 TGFB1I1O43294 461 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 ZNF623O75123 536 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 RAB27AP51159 221 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 MCL1Q07820 350 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 C9orf50Q5SZB4 431 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.09■■□□□ 1.29
CACNB3-210ENST00000548874 SYCP3Q8IZU3 236 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 ADSSL1Q8N142 457 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 CRIPAKQ8N1N5 446 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 UBE2OQ9C0C9 1292 aaKnown RBP23.09■■□□□ 1.29
CACNB3-210ENST00000548874 HAPLN2Q9GZV7 340 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 GBP3Q9H0R5 595 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 CDT1Q9H211 546 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 KCTD10Q9H3F6 313 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 CXXC1Q9P0U4 656 aaPredicted RBP23.09■■□□□ 1.29
CACNB3-210ENST00000548874 MAPK8IP1Q9UQF2 711 aa23.09■■□□□ 1.29
CACNB3-210ENST00000548874 NPTXRO95502 500 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 MCF2P10911 925 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 ADSSP30520 456 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 SNRPFP62306 86 aaKnown RBP23.08■■□□□ 1.29
CACNB3-210ENST00000548874 DCAF4L1Q3SXM0 396 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 ZNF568Q3ZCX4 644 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 ECHDC2Q86YB7 292 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 ADPGKQ9BRR6 497 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 PRO3102Q9H379 93 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 PCDHB2Q9Y5E7 798 aa23.08■■□□□ 1.29
CACNB3-210ENST00000548874 A0A0B4J269 797 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 PPP1R3GB7ZBB8 358 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 CLDN3O15551 220 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 SKIP12755 728 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 CD44P16070 742 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 ATF7P17544 494 aaPredicted RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 PPP1R2P41236 205 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 NOLC1Q14978 699 aaKnown RBP eCLIP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 SHHQ15465 462 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 SLFN12LQ6IEE8 588 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 APBB1IPQ7Z5R6 666 aaPredicted RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 MRPL10Q7Z7H8 261 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 ZNF598Q86UK7 904 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 SMG8Q8ND04 991 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 MTIF3Q9H2K0 278 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 ELAC1Q9H777 363 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 TYW1Q9NV66 732 aaKnown RBP23.07■■□□□ 1.28
CACNB3-210ENST00000548874 ANKFY1Q9P2R3 1169 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 TTC3P53804 2025 aa23.07■■□□□ 1.28
CACNB3-210ENST00000548874 PDXKO00764 312 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 AMHP03971 560 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 GARTP22102 1010 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 KCNJ6P48051 423 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 NLRP12P59046 1061 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 DEFB103AP81534 67 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms