RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RPS6KC1Q96S38 1066 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 HERC2P3Q9BVR0 1158 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 IPPQ9Y573 584 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 CNTNAP2Q9UHC6 1331 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 FRYLO94915 3013 aa18.39■□□□□ 0.53
SSH1-208ENST00000548522 FAM205CA6NFA0 338 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 EFEMP2O95967 443 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 ALDH2P05091 517 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 P4HBP07237 508 aaKnown RBP18.38■□□□□ 0.53
SSH1-208ENST00000548522 SPATA31D3P0C874 917 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
SSH1-208ENST00000548522 YWHABP31946 246 aaKnown RBP18.38■□□□□ 0.53
SSH1-208ENST00000548522 OR1G1P47890 313 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 SCNN1GP51170 649 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 CYP4A11Q02928 519 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 EARS2Q5JPH6 523 aaKnown RBP18.38■□□□□ 0.53
SSH1-208ENST00000548522 C15orf39Q6ZRI6 1047 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 SPATA31D4Q6ZUB0 917 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 RNF168Q8IYW5 571 aaPredicted RBP18.38■□□□□ 0.53
SSH1-208ENST00000548522 DYDC2Q96IM9 177 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 GAD1Q99259 594 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 XPNPEP1Q9NQW7 623 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 FBXL21Q9UKT6 434 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
SSH1-208ENST00000548522 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 CCNT1O60563 726 aaKnown RBP18.37■□□□□ 0.53
SSH1-208ENST00000548522 RFC5P40937 340 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 DSC1Q08554 894 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 SPIRE1Q08AE8 756 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 CTTNQ14247 550 aaKnown RBP18.37■□□□□ 0.53
SSH1-208ENST00000548522 NCAPH2Q6IBW4 605 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 GALNT17Q6IS24 598 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 NEK8Q86SG6 692 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 CCDC105Q8IYK2 499 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 ST13P5Q8NFI4 369 aaPredicted RBP18.37■□□□□ 0.53
SSH1-208ENST00000548522 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
SSH1-208ENST00000548522 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 MYADMQ96S97 322 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 PHF20Q9BVI0 1012 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 APOL6Q9BWW8 343 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
SSH1-208ENST00000548522 ZNF292O60281 2723 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CCDC195A0A1B0GUA6 201 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CCDC194A0A1B0GVG4 234 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 KRBA1A5PL33 1030 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 INPPL1O15357 1258 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CLUHO75153 1309 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 ERLIN2O94905 339 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 REC8O95072 547 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CFHP08603 1231 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 ITGA4P13612 1032 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 GLUD2P49448 558 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 SCRN1Q12765 414 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 XKR9Q5GH70 373 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 KIAA0319Q5VV43 1072 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 PPP4R3AQ6IN85 833 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 PIK3AP1Q6ZUJ8 805 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CMASQ8NFW8 434 aaPredicted RBP18.36■□□□□ 0.53
SSH1-208ENST00000548522 ASAP3Q8TDY4 903 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 RABGGTAQ92696 567 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 NKD2Q969F2 451 aaPredicted RBP18.36■□□□□ 0.53
SSH1-208ENST00000548522 ZNF707Q96C28 371 aaPredicted RBP18.36■□□□□ 0.53
SSH1-208ENST00000548522 NXF3Q9H4D5 531 aaKnown RBP18.36■□□□□ 0.53
SSH1-208ENST00000548522 CACNG4Q9UBN1 327 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
SSH1-208ENST00000548522 GLUD1P00367 558 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 ADH1AP07327 375 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
SSH1-208ENST00000548522 EPHA7Q15375 998 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 AMHR2Q16671 573 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 CDR2LQ86X02 465 aaPredicted RBP18.35■□□□□ 0.53
SSH1-208ENST00000548522 DTWD2Q8NBA8 298 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 WDR6Q9NNW5 1121 aaKnown RBP18.35■□□□□ 0.53
SSH1-208ENST00000548522 STK39Q9UEW8 545 aa18.35■□□□□ 0.53
SSH1-208ENST00000548522 INO80B-WBP1J3KQ70 363 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 B4GALT5O43286 388 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 DKC1O60832 514 aaKnown RBP eCLIP18.34■□□□□ 0.53
SSH1-208ENST00000548522 PTENP60484 403 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 DSG1Q02413 1049 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 MBTD1Q05BQ5 628 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 CAPSQ13938 189 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 PALB2Q86YC2 1186 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 GLYCTKQ8IVS8 523 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 SMG7Q92540 1137 aaKnown RBP18.34■□□□□ 0.53
SSH1-208ENST00000548522 MTRQ99707 1265 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 IGSF9Q9P2J2 1179 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 CA14Q9ULX7 337 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 ARID2Q68CP9 1835 aa18.34■□□□□ 0.53
SSH1-208ENST00000548522 EP300Q09472 2414 aaPredicted RBP18.33■□□□□ 0.53
SSH1-208ENST00000548522 GCFC2P16383 781 aaKnown RBP18.33■□□□□ 0.52
SSH1-208ENST00000548522 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms