RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MIS18BP1Q6P0N0 1132 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 UHMK1Q8TAS1 419 aaKnown RBP13.75□□□□□ -0.21
SCAF11-209ENST00000547018 GOLGA5Q8TBA6 731 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 TXNRD2Q9NNW7 524 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 PFASO15067 1338 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 FAM153BP0C7A2 387 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 NLRP11P59045 1033 aaKnown RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 SF3A3Q12874 501 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 FAM153CQ494X1 144 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 BCCIPQ9P287 314 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 FAM153AQ9UHL3 310 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 KIF4AO95239 1232 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 MARCKSL1P49006 195 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 FAM118BQ9BPY3 351 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 NR2E1Q9Y466 385 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 TCF7P36402 384 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 WNT7BP56706 349 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 GRM1Q13255 1194 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 CCNI2Q6ZMN8 369 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 SYN2Q92777 582 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 AGPAT1Q99943 283 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 ASCC2Q9H1I8 757 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 DMAC2Q9NW81 257 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 AMFRQ9UKV5 643 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 EXOC7Q9UPT5 735 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
SCAF11-209ENST00000547018 BZW2Q9Y6E2 419 aaKnown RBP13.74□□□□□ -0.21
SCAF11-209ENST00000547018 PJA2O43164 708 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 RAD51CO43502 376 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 SPOPO43791 374 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 GJB6O95452 261 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 MAP1SQ66K74 1059 aaPredicted RBP13.73□□□□□ -0.21
SCAF11-209ENST00000547018 SLC39A4Q6P5W5 647 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
SCAF11-209ENST00000547018 SPATC1LQ9H0A9 340 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 STIM2Q9P246 746 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 SMIM23A6NLE4 172 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 PPP1R37O75864 691 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 LCA5LO95447 670 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
SCAF11-209ENST00000547018 GPR162Q16538 588 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 MAATS1Q7Z4T9 603 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 RHPN2Q8IUC4 686 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 KREMEN1Q96MU8 473 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SCAF11-209ENST00000547018 AZI2Q9H6S1 392 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 DBR1Q9UK59 544 aaKnown RBP13.73□□□□□ -0.21
SCAF11-209ENST00000547018 RAB21Q9UL25 225 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 PTPN22Q9Y2R2 807 aa13.73□□□□□ -0.21
SCAF11-209ENST00000547018 CAPN2P17655 700 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 STAT5BP51692 787 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 DMTNQ08495 405 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ORC1Q13415 861 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 MEI1Q5TIA1 1274 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 NOP9Q86U38 636 aaKnown RBP13.72□□□□□ -0.21
SCAF11-209ENST00000547018 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 PARD3BQ8TEW8 1205 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 GPRASP2Q96D09 838 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 NT5C1BQ96P26 610 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 MSTO1Q9BUK6 570 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 TRIM7Q9C029 511 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 SPON1Q9HCB6 807 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 NOC2LQ9Y3T9 749 aaKnown RBP13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ATP4AP20648 1035 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 JAM2P57087 298 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 GTF2BQ00403 316 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ZC3H3Q8IXZ2 948 aaKnown RBP13.72□□□□□ -0.21
SCAF11-209ENST00000547018 ZNF653Q96CK0 615 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 GOLGA6BA6NDN3 693 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 RNF40O75150 1001 aa13.72□□□□□ -0.21
SCAF11-209ENST00000547018 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms