RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ARF4P18085 180 aaPredicted RBP15.96■□□□□ 0.15
COL2A1-209ENST00000546974 TRAPPC10P48553 1259 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.15
COL2A1-209ENST00000546974 ZNF174Q15697 407 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 CES5AQ6NT32 575 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 FAM184AQ8NB25 1140 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 MCPH1Q8NEM0 835 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 ERMNQ8TAM6 284 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 NECTIN4Q96NY8 510 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 APOL5Q9BWW9 433 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 VN1R3Q9BXE9 311 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 POLR3FQ9H1D9 316 aaPredicted RBP15.96■□□□□ 0.15
COL2A1-209ENST00000546974 ADAM7Q9H2U9 754 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 DZANK1Q9NVP4 752 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 GIT1Q9Y2X7 761 aa15.96■□□□□ 0.15
COL2A1-209ENST00000546974 ARL5CA6NH57 179 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 MUTP22033 750 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 RPA1P27694 616 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 ZXDAP98168 799 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 PTPN14Q15678 1187 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 C8orf34Q49A92 452 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 TTC38Q5R3I4 469 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 HFE2Q6ZVN8 426 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 PPFIBP1Q86W92 1011 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 NOSTRINQ8IVI9 506 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 HACE1Q8IYU2 909 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 SLC22A17Q8WUG5 538 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 TRIM6Q9C030 488 aaPredicted RBP15.95■□□□□ 0.14
COL2A1-209ENST00000546974 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
COL2A1-209ENST00000546974 A0A1B0GUA9 196 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 MTHFRP42898 656 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
COL2A1-209ENST00000546974 CDCA2Q69YH5 1023 aaPredicted RBP15.94■□□□□ 0.14
COL2A1-209ENST00000546974 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 TRIM67Q6ZTA4 783 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 MAEAQ7L5Y9 396 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 BMP8AQ7Z5Y6 402 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 MFSD14AQ96MC6 490 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 GAD1Q99259 594 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 KCNH6Q9H252 994 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 GPRC5CQ9NQ84 441 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 PRMT7Q9NVM4 692 aaPredicted RBP15.94■□□□□ 0.14
COL2A1-209ENST00000546974 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
COL2A1-209ENST00000546974 NR2E1Q9Y466 385 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 HES2Q9Y543 173 aa15.94■□□□□ 0.14
COL2A1-209ENST00000546974 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 LRRIQ4A6NIV6 560 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 LILRB3O75022 631 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 SOD2P04179 222 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 EPCAMP16422 314 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 MLH1P40692 756 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 SCNN1GP51170 649 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 DSC1Q08554 894 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 FAM187BQ17R55 369 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 HAUS3Q68CZ6 603 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 ZBTB8OSQ8IWT0 167 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 C4orf32Q8N8J7 132 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 RIPOR3Q96MK2 946 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 KLHL5Q96PQ7 755 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 EMILIN2Q9BXX0 1053 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 POMKQ9H5K3 350 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 MRPL17Q9NRX2 175 aaKnown RBP15.93■□□□□ 0.14
COL2A1-209ENST00000546974 MARCH5Q9NX47 278 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 MIOSQ9NXC5 875 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 SSX2IPQ9Y2D8 614 aa15.93■□□□□ 0.14
COL2A1-209ENST00000546974 TMEM221A6NGB7 291 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 M0R296 226 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 B4GALT5O43286 388 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 NR1I2O75469 434 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 NPTXRO95502 500 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 EFEMP2O95967 443 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 CYP11B2P19099 503 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 OR1G1P47890 313 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 ATAT1Q5SQI0 421 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 RARS2Q5T160 578 aaKnown RBP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 KIAA1841Q6NSI8 718 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 PADI6Q6TGC4 694 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 CABP7Q86V35 215 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 RNF168Q8IYW5 571 aaPredicted RBP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 C12orf76Q8N812 135 aaPredicted RBP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 ZFP42Q96MM3 310 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 HERC2P3Q9BVR0 1158 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 APOL6Q9BWW8 343 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 C2orf40Q9H1Z8 148 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 FZD8Q9H461 694 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 NXF3Q9H4D5 531 aaKnown RBP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 CDH22Q9UJ99 828 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 PRG3Q9Y2Y8 225 aaPredicted RBP15.92■□□□□ 0.14
COL2A1-209ENST00000546974 STK24Q9Y6E0 443 aa15.92■□□□□ 0.14
COL2A1-209ENST00000546974 ARHGEF35A5YM69 484 aa15.91■□□□□ 0.14
COL2A1-209ENST00000546974 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL2A1-209ENST00000546974 URODP06132 367 aa15.91■□□□□ 0.14
COL2A1-209ENST00000546974 CNPP09543 421 aaKnown RBP15.91■□□□□ 0.14
COL2A1-209ENST00000546974 AKAP5P24588 427 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms