RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 ACKR2O00590 384 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 INPPL1O15357 1258 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 HIP1RO75146 1068 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 NPTXRO95502 500 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
CCDC38-205ENST00000546947 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 PEX3P56589 373 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 ERVFC1P60507 584 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 PTPAQ15257 358 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 PUS10Q3MIT2 529 aaKnown RBP16.3■□□□□ 0.2
CCDC38-205ENST00000546947 DAW1Q8N136 415 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 ADAMTS19Q8TE59 1207 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 TMEM169Q96HH4 297 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
CCDC38-205ENST00000546947 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
CCDC38-205ENST00000546947 KCNG1Q9UIX4 513 aa16.3■□□□□ 0.2
CCDC38-205ENST00000546947 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 ABCB7O75027 752 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 SSBP05455 408 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 GALTP07902 379 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 PLA2G4BP0C869 781 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 GRIN1Q05586 938 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 MAPK7Q13164 816 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 DMP1Q13316 513 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 CDR2LQ86X02 465 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 ZNF280BQ86YH2 543 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 PLIN2Q99541 437 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 CDCA3Q99618 268 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 TMEM175Q9BSA9 504 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 KIFC3Q9BVG8 833 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 NXF3Q9H4D5 531 aaKnown RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 TMEM134Q9H6X4 195 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 HES2Q9Y543 173 aa16.29■□□□□ 0.2
CCDC38-205ENST00000546947 MORC2Q9Y6X9 1032 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-205ENST00000546947 ARL5CA6NH57 179 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 K7ERI5 159 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 DDHD2O94830 711 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 POMCP01189 267 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 LIG1P18858 919 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 LTBRP36941 435 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 NPTX2P47972 431 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 NRIP1P48552 1158 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 SLC11A1P49279 550 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 ADAM15Q13444 863 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 PLPP4Q5VZY2 271 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 GAD1Q99259 594 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 TCF25Q9BQ70 676 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 CCSER1Q9C0I3 900 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 TLE6Q9H808 572 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 KMT5AQ9NQR1 393 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 ENTPD7Q9NQZ7 604 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 ARHGAP28Q9P2N2 729 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 DNAJB4Q9UDY4 337 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 PCDHGC5Q9Y5F6 944 aa16.28■□□□□ 0.2
CCDC38-205ENST00000546947 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
CCDC38-205ENST00000546947 BRWD1Q9NSI6 2320 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 TTLL13PA6NNM8 815 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 H3BQ06 376 aaPredicted RBP16.27■□□□□ 0.2
CCDC38-205ENST00000546947 ALDH2P05091 517 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 MLH1P40692 756 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.2
CCDC38-205ENST00000546947 DCAF4L1Q3SXM0 396 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
CCDC38-205ENST00000546947 RBM23Q86U06 439 aaKnown RBP16.27■□□□□ 0.2
CCDC38-205ENST00000546947 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 PARP2Q9UGN5 583 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 FBXO2Q9UK22 296 aaPredicted RBP16.27■□□□□ 0.2
CCDC38-205ENST00000546947 FAM50BQ9Y247 325 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
CCDC38-205ENST00000546947 LINC01565O15544 149 aa16.26■□□□□ 0.19
CCDC38-205ENST00000546947 EDN1P05305 212 aa16.26■□□□□ 0.19
CCDC38-205ENST00000546947 PLS3P13797 630 aa16.26■□□□□ 0.19
CCDC38-205ENST00000546947 PLCG1P19174 1290 aa16.26■□□□□ 0.19
CCDC38-205ENST00000546947 AKAP5P24588 427 aa16.26■□□□□ 0.19
CCDC38-205ENST00000546947 MARCKSP29966 332 aaPredicted RBP16.26■□□□□ 0.19
CCDC38-205ENST00000546947 NDUFV1P49821 464 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms