RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 STX17P56962 302 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
TROAP-204ENST00000546776 FKBP3Q00688 224 aaKnown RBP12.29□□□□□ -0.44
TROAP-204ENST00000546776 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
TROAP-204ENST00000546776 MYBPC2Q14324 1141 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 FAM187BQ17R55 369 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 SLFN12LQ6IEE8 588 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 APBB1IPQ7Z5R6 666 aaPredicted RBP12.29□□□□□ -0.44
TROAP-204ENST00000546776 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 CSGALNACT2Q8N6G5 542 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 HERVK_113Q902F9 699 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 OSMRQ99650 979 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 ADAMTS10Q9H324 1103 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 SEMA6BQ9H3T3 888 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 FZD8Q9H461 694 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 CDY2AQ9Y6F7 541 aa12.29□□□□□ -0.44
TROAP-204ENST00000546776 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 ZBBXA8MT70 800 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
TROAP-204ENST00000546776 CETN3O15182 167 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 PIGRP01833 764 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
TROAP-204ENST00000546776 AXLP30530 894 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 MATR3P43243 847 aaKnown RBP eCLIP12.28□□□□□ -0.44
TROAP-204ENST00000546776 MBTD1Q05BQ5 628 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 GSE1Q14687 1217 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 NFIL3Q16649 462 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 TTI2Q6NXR4 508 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 ARMCX5Q6P1M9 558 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 OTOP2Q7RTS6 562 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 CATSPER4Q7RTX7 472 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 RNF214Q8ND24 703 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 ANKRD20A12PQ8NF67 263 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
TROAP-204ENST00000546776 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
TROAP-204ENST00000546776 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 CCDC113Q9H0I3 377 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 MAGEC2Q9UBF1 373 aaPredicted RBP12.28□□□□□ -0.44
TROAP-204ENST00000546776 NFE2L3Q9Y4A8 694 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
TROAP-204ENST00000546776 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 GPR182O15218 404 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 EFCAB14O75071 495 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 BAIAP3O94812 1187 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 GNA14O95837 355 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 NR3C1P04150 777 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 CTSHP09668 335 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 GARTP22102 1010 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 HOXD13P35453 343 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 SPAG1Q07617 926 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 KCNA1Q09470 495 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 IQCB1Q15051 598 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 ZCWPW2Q504Y3 356 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 FAM26DQ5JW98 314 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 FAM43BQ6ZT52 329 aaPredicted RBP12.27□□□□□ -0.45
TROAP-204ENST00000546776 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 LUZP1Q86V48 1076 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 GAS2L3Q86XJ1 694 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
TROAP-204ENST00000546776 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 POMGNT1Q8WZA1 660 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 TCHPQ9BT92 498 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 RBSNQ9H1K0 784 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 AGPAT3Q9NRZ7 376 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 FRMD4BQ9Y2L6 1034 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 SQORQ9Y6N5 450 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 CNTNAP2Q9UHC6 1331 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 ZMYM2Q9UBW7 1377 aa12.27□□□□□ -0.45
TROAP-204ENST00000546776 SOX1O00570 391 aaPredicted RBP12.26□□□□□ -0.45
TROAP-204ENST00000546776 N4BP3O15049 544 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 CLDN3O15551 220 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 TGFB1I1O43294 461 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 RPS6KA5O75582 802 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 TOM1L1O75674 476 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 LDHAP00338 332 aaKnown RBP12.26□□□□□ -0.45
TROAP-204ENST00000546776 TPM2P07951 284 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 CDK11BP21127 795 aaKnown RBP12.26□□□□□ -0.45
TROAP-204ENST00000546776 NR2F2P24468 414 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 KCNJ6P48051 423 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 PMS1P54277 932 aaKnown RBP12.26□□□□□ -0.45
TROAP-204ENST00000546776 MGAT3Q09327 533 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 ADAM9Q13443 819 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 IKBKEQ14164 716 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 TRIM71Q2Q1W2 868 aaKnown RBP12.26□□□□□ -0.45
TROAP-204ENST00000546776 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
TROAP-204ENST00000546776 ZNF697Q5TEC3 545 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms