RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SLC40A1Q9NP59 571 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 DDX3XO00571 662 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 SLITRK3O94933 977 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 COMTP21964 271 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 PSMC4P43686 418 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 IRX4P78413 519 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 HGSNATQ68CP4 663 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 HIBCHQ6NVY1 386 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 TBC1D1Q86TI0 1168 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 SESTD1Q86VW0 696 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 ANKS4BQ8N8V4 417 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 PRPF38AQ8NAV1 312 aaKnown RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 CRAMP1Q96RY5 1269 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 C10orf88Q9H8K7 445 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 AGPAT3Q9NRZ7 376 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 MYH6P13533 1939 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 GOLGA4Q13439 2230 aaKnown RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 GOLGA8RI6L899 631 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 PJA2O43164 708 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 PPP2R2AP63151 447 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 MEI1Q5TIA1 1274 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 SRRM1Q8IYB3 904 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 KIRREL3Q8IZU9 778 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ATG4CQ96DT6 458 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 FAM20AQ96MK3 541 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ACCSQ96QU6 501 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 RNF146Q9NTX7 359 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF70Q9UC06 446 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 PHRF1Q9P1Y6 1649 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 TJP1Q07157 1748 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 SPAG7O75391 227 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 NEBLO76041 1014 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 MMEP08473 750 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 YWHABP31946 246 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 MMP14P50281 582 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 AP3B2Q13367 1082 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 NEDD9Q14511 834 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 TMED2Q15363 201 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 SH3BP5LQ7L8J4 393 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 SYT2Q8N9I0 419 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 FBXO25Q8TCJ0 367 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 KIFAP3Q92845 792 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 SLC35C1Q96A29 364 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 RAB17Q9H0T7 212 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 HSPBP1Q9NZL4 362 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 MRPL42Q9Y6G3 142 aaKnown RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 DCCP43146 1447 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ZBTB16Q05516 673 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ITGB3BPQ13352 177 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 CUL1Q13616 776 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 CCDC63Q8NA47 563 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 KLF6Q99612 283 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-203ENST00000546084 ISCUQ9H1K1 167 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 TMBIM4Q9HC24 238 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
TRAF1-203ENST00000546084 LRRD1A4D1F6 860 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 PDXKO00764 312 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 NOL4O94818 638 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 QARSP47897 775 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 CLNS1AP54105 237 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SESN3P58005 492 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 LRRN4Q8WUT4 740 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SEC16BQ96JE7 1060 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 DDX20Q9UHI6 824 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 TTLL3Q9Y4R7 772 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 STX2P32856 288 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 BFSP1Q12934 665 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SLC29A2Q14542 456 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SMTNL2Q2TAL5 461 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 STRIP1Q5VSL9 837 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 NUGGCQ68CJ6 796 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 TATDN2Q93075 761 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 PBKQ96KB5 322 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 EDEM3Q9BZQ6 932 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 VCPKMTQ9H867 229 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 SUFUQ9UMX1 484 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 DCDC2CA8MYV0 355 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 FSBPO95073 299 aa10.49□□□□□ -0.73
TRAF1-203ENST00000546084 BRDTQ58F21 947 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 INPP4AQ96PE3 977 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-203ENST00000546084 AGPAT1Q99943 283 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms