RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ADKP55263 362 aaKnown RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 NLRP11P59045 1033 aaKnown RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 MCCD1P59942 119 aaPredicted RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 ZSCAN30Q86W11 494 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 CBWD2Q8IUF1 395 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 PCSK9Q8NBP7 692 aaKnown RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 NLRP7Q8WX94 980 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 ZBTB45Q96K62 511 aaPredicted RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 PPP1R16BQ96T49 567 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 FAM49AQ9H0Q0 323 aaPredicted RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 KIAA1586Q9HCI6 787 aa33.18■■■□□ 2.9
CCM2-219ENST00000544363 PRMT7Q9NVM4 692 aaPredicted RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 EIF2AK3Q9NZJ5 1116 aaKnown RBP33.18■■■□□ 2.9
CCM2-219ENST00000544363 TTLL13PA6NNM8 815 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 TREHO43280 583 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 ADRB2P07550 413 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 KCNMA1Q12791 1236 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 FAM187BQ17R55 369 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 NBPF20Q3BBV1 942 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 RUFY4Q6ZNE9 571 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 HAPLN2Q9GZV7 340 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 AGO2Q9UKV8 859 aaKnown RBP33.17■■■□□ 2.9
CCM2-219ENST00000544363 EXTL3O43909 919 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 FXR1P51114 621 aaKnown RBP eCLIP33.17■■■□□ 2.9
CCM2-219ENST00000544363 VAMP7P51809 220 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 C1QTNF8P60827 252 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 ZNF200P98182 395 aaPredicted RBP33.17■■■□□ 2.9
CCM2-219ENST00000544363 FIGNQ5HY92 759 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 RNF180Q86T96 592 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 IQCDQ96DY2 449 aa33.17■■■□□ 2.9
CCM2-219ENST00000544363 A0A0B4J269 797 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 TOM1L1O75674 476 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 MYCNP04198 464 aaPredicted RBP33.16■■■□□ 2.9
CCM2-219ENST00000544363 TRIM21P19474 475 aaKnown RBP33.16■■■□□ 2.9
CCM2-219ENST00000544363 PRPF4BQ13523 1007 aaKnown RBP33.16■■■□□ 2.9
CCM2-219ENST00000544363 HSP90AA2PQ14568 343 aaPredicted RBP33.16■■■□□ 2.9
CCM2-219ENST00000544363 CNGA4Q8IV77 575 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 TTYH3Q9C0H2 523 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 MMRN2Q9H8L6 949 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 ANKFY1Q9P2R3 1169 aa33.16■■■□□ 2.9
CCM2-219ENST00000544363 MFAP3LO75121 409 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 LDHAP00338 332 aaKnown RBP33.15■■■□□ 2.9
CCM2-219ENST00000544363 IQCF3P0C7M6 154 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 MATR3P43243 847 aaKnown RBP eCLIP33.15■■■□□ 2.9
CCM2-219ENST00000544363 MFSD14AQ96MC6 490 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 SCLT1Q96NL6 688 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 FAM213AQ9BRX8 229 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 MSTO1Q9BUK6 570 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 ADAMTS10Q9H324 1103 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 GTF2IRD1Q9UHL9 959 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 CAPN11Q9UMQ6 739 aa33.15■■■□□ 2.9
CCM2-219ENST00000544363 TTC26A0AVF1 554 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 CLDN3O15551 220 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 TRIM49P0CI25 452 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 TRIM49CP0CI26 452 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 CCZ1BP86790 482 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 CCZ1P86791 482 aaPredicted RBP33.14■■■□□ 2.9
CCM2-219ENST00000544363 TSHZ1Q6ZSZ6 1077 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 SRGAP1Q7Z6B7 1085 aa33.14■■■□□ 2.9
CCM2-219ENST00000544363 TRIP12Q14669 1992 aaPredicted RBP33.14■■■□□ 2.9
CCM2-219ENST00000544363 GTPBP10A4D1E9 387 aaKnown RBP33.13■■■□□ 2.89
CCM2-219ENST00000544363 FMO5P49326 533 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 PLEKHO2Q8TD55 490 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 DNAJB3Q8WWF6 145 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 PRIMPOLQ96LW4 560 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 ZNF233A6NK53 670 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 RNF225M0QZC1 329 aaPredicted RBP33.13■■■□□ 2.89
CCM2-219ENST00000544363 GPR32O75388 356 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 DLG4P78352 724 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 ENPEPQ07075 957 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 CYP24A1Q07973 514 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 KIZQ2M2Z5 673 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 ATF7IP2Q5U623 682 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 LHX8Q68G74 356 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 CCDC51Q96ER9 411 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 PANX2Q96RD6 677 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 CRACR2AQ9BSW2 395 aa33.13■■■□□ 2.89
CCM2-219ENST00000544363 A0A1W2PQJ5 194 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 B4GALT5O43286 388 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 PROZP22891 400 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 AMHR2Q16671 573 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 GBP6Q6ZN66 633 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 CCDC112Q8NEF3 446 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 NEK11Q8NG66 645 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 TMC2Q8TDI7 906 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 TCHPQ9BT92 498 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 TMX1Q9H3N1 280 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 PTPRHQ9HD43 1115 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 FAM207AQ9NSI2 230 aaPredicted RBP33.12■■■□□ 2.89
CCM2-219ENST00000544363 PTPN22Q9Y2R2 807 aa33.12■■■□□ 2.89
CCM2-219ENST00000544363 LUC7L2Q9Y383 392 aaKnown RBP33.12■■■□□ 2.89
CCM2-219ENST00000544363 ABLIM1O14639 778 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 NRDCO43847 1150 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 CSDE1O75534 798 aaKnown RBP33.11■■■□□ 2.89
CCM2-219ENST00000544363 SKILP12757 684 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 MCL1Q07820 350 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 TMEM62Q0P6H9 643 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 EXOC3L4Q17RC7 722 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 C1orf220Q5T0J3 134 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 SESTD1Q86VW0 696 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms