RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 KYQ8NBH2 561 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 PPP1R14CQ8TAE6 165 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 FBXO41Q8TF61 875 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 TMEM60Q9H2L4 133 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 DCP1AQ9NPI6 582 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-207ENST00000544052 Q9UFV3 132 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 PHTF1Q9UMS5 762 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 PFKLP17858 780 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 KCNQ1P51787 676 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 MAP2K6P52564 334 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 NRG3P56975 720 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 TMEM200BQ69YZ2 307 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 MIGA2Q7L4E1 593 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 CXXC5Q7LFL8 322 aaKnown RBP4.68□□□□□ -1.66
SCFD1-207ENST00000544052 MORC1Q86VD1 984 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 LINC00482Q8N8I6 264 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 GPR156Q8NFN8 814 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 PLBD2Q8NHP8 589 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 WDR92Q96MX6 357 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 STRBPQ96SI9 672 aaKnown RBP4.68□□□□□ -1.66
SCFD1-207ENST00000544052 C7orf25Q9BPX7 421 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 FNIP2Q9P278 1114 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 SAE1Q9UBE0 346 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-207ENST00000544052 L1RE1Q9UN81 338 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 SIK3Q9Y2K2 1263 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 A0A1W2PR48 441 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 PRAMEF4O60810 478 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 MAFO75444 373 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-207ENST00000544052 FTLP02792 175 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-207ENST00000544052 SLC6A9P48067 706 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 ANO6Q4KMQ2 910 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 KIAA0319LQ8IZA0 1049 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 MSL3Q8N5Y2 521 aaKnown RBP4.67□□□□□ -1.66
SCFD1-207ENST00000544052 PIK3C3Q8NEB9 887 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 NKD2Q969F2 451 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-207ENST00000544052 EPB41L4BQ9H329 900 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 ARMT1Q9H993 441 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 GCM1Q9NP62 436 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 POLHQ9Y253 713 aa4.67□□□□□ -1.66
SCFD1-207ENST00000544052 ZNF608Q9ULD9 1512 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-207ENST00000544052 H0Y858 1186 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 PEX10O60683 326 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 HRGP04196 525 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 GAAP10253 952 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 SYN1P17600 705 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 AGFG1P52594 562 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 SEMA5AQ13591 1074 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 UBE3CQ15386 1083 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 CCDC157Q569K6 752 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 TRMT10BQ6PF06 316 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 KLHDC4Q8TBB5 520 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 ZCCHC14Q8WYQ9 949 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 HOXB13Q92826 284 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 DMRTA2Q96SC8 542 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 ELAC2Q9BQ52 826 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 TARBP1Q13395 1621 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 EIF4G3O43432 1585 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 CHD1O14646 1710 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 RPTORQ8N122 1335 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 TEX51A0A1B0GUA7 166 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 PQBP1O60828 265 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 PEX2P28328 305 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 EIF4HQ15056 248 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 CNN3Q15417 329 aaKnown RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 DAAM2Q86T65 1068 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 DRC7Q8IY82 874 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 SPICE1Q8N0Z3 855 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 CCHCR1Q8TD31 782 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 RGMAQ96B86 450 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 IL17RAQ96F46 866 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-207ENST00000544052 TLR9Q9NR96 1032 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 STAP2Q9UGK3 403 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 STXBP5LQ9Y2K9 1186 aa4.66□□□□□ -1.66
SCFD1-207ENST00000544052 TOPBP1Q92547 1522 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 EIF3JO75822 258 aaKnown RBP4.65□□□□□ -1.66
SCFD1-207ENST00000544052 KLHL18O94889 574 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 IL13P35225 146 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.66
SCFD1-207ENST00000544052 FAM193AP78312 1265 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 ADAM15Q13444 863 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 VPS72Q15906 364 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 MLANAQ16655 118 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 LONRF1Q17RB8 773 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 RNF220Q5VTB9 566 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 DARS2Q6PI48 645 aaKnown RBP4.65□□□□□ -1.66
SCFD1-207ENST00000544052 SRLQ86TD4 932 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 NUDT10Q8NFP7 164 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 FBXO18Q8NFZ0 1043 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 SNX33Q8WV41 574 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 NUDT11Q96G61 164 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 PDCD2LQ9BRP1 358 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 OSBPL6Q9BZF3 934 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 TDP1Q9NUW8 608 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 KLHL11Q9NVR0 708 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 RTEL1Q9NZ71 1219 aa4.65□□□□□ -1.66
SCFD1-207ENST00000544052 PCDHA3Q9Y5H8 950 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms