RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PCDHB2Q9Y5E7 798 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 RALGAPA2Q2PPJ7 1873 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 MEIS3P2A8K0S8 358 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 H0YCG3 227 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 N4BP3O15049 544 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 ZNF623O75123 536 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 NPTXRO95502 500 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 RAB27AP51159 221 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 FAM160A1Q05DH4 1040 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 ZC2HC1CQ53FD0 456 aaPredicted RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 ATF7IP2Q5U623 682 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 LPPQ93052 612 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 TIFAQ96CG3 184 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 ACO2Q99798 780 aaKnown RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 TARS2Q9BW92 718 aaKnown RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 MRPL4Q9BYD3 311 aaKnown RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 ST6GALNAC4Q9H4F1 302 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 OLFML3Q9NRN5 406 aa16.59■□□□□ 0.25
CD9-210ENST00000543916 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
CD9-210ENST00000543916 KLRC4O43908 158 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 NR1I2O75469 434 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 PPP1R37O75864 691 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 EOMESO95936 686 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 SKIP12755 728 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 CASP5P51878 434 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 GTF2BQ00403 316 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 EHHADHQ08426 723 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 STRN3Q13033 797 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 PAN2Q504Q3 1202 aaKnown RBP16.58■□□□□ 0.24
CD9-210ENST00000543916 CLLU1OSQ5K130 101 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 ZNF720Q7Z2F6 126 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
CD9-210ENST00000543916 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 STRA6Q9BX79 667 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.24
CD9-210ENST00000543916 MRPL44Q9H9J2 332 aaKnown RBP16.58■□□□□ 0.24
CD9-210ENST00000543916 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
CD9-210ENST00000543916 TBX20Q9UMR3 447 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 TNFSF13BQ9Y275 285 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 HES2Q9Y543 173 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 IPPQ9Y573 584 aa16.58■□□□□ 0.24
CD9-210ENST00000543916 ABLIM1O14639 778 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 GTPBP6O43824 516 aaPredicted RBP16.57■□□□□ 0.24
CD9-210ENST00000543916 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
CD9-210ENST00000543916 MYBP10242 640 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 SCP2P22307 547 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 TAP1Q03518 808 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 AGMOQ6ZNB7 445 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 HELQQ8TDG4 1101 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 TTYH1Q9H313 450 aaPredicted RBP16.57■□□□□ 0.24
CD9-210ENST00000543916 PTPRHQ9HD43 1115 aa16.57■□□□□ 0.24
CD9-210ENST00000543916 PVALEFA0A1B0GWK0 134 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 LINC01553A4QN01 128 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 GCNT3O95395 438 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 PROZP22891 400 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 UBE2HP62256 183 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 PPP2R2DQ66LE6 453 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 MAP4K3Q8IVH8 894 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 CMTR2Q8IYT2 770 aaKnown RBP16.56■□□□□ 0.24
CD9-210ENST00000543916 SLC17A8Q8NDX2 589 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 HVCN1Q96D96 273 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 PGBD4Q96DM1 585 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
CD9-210ENST00000543916 CASD1Q96PB1 797 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 ADPGKQ9BRR6 497 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
CD9-210ENST00000543916 CDT1Q9H211 546 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
CD9-210ENST00000543916 HOXA2O43364 376 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 PIGRP01833 764 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 MYL1P05976 194 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 LINC00271P0C7V0 271 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 ITGA4P13612 1032 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 ABCD1P33897 745 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 KCNA1Q09470 495 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 DPYDQ12882 1025 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 BTG3Q14201 252 aaPredicted RBP16.55■□□□□ 0.24
CD9-210ENST00000543916 DCAF4L1Q3SXM0 396 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 FAM26FQ5R3K3 315 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
CD9-210ENST00000543916 GPR153Q6NV75 609 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 SLC39A4Q6P5W5 647 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 MPZL3Q6UWV2 235 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 Q7L0L9 218 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 ZBTB33Q86T24 672 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 FIBCD1Q8N539 461 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms