RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 SLC30A4O14863 429 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PPP1R12AO14974 1030 aaPredicted RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FIBPO43427 364 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PRMT3O60678 531 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 LILRB5O75023 590 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 LRRN2O75325 713 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 STAM2O75886 525 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 CXCL14O95715 111 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FGAP02671 866 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 P4HBP07237 508 aaKnown RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 SRFP11831 508 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 INSRRP14616 1297 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 MARK3P27448 753 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PMLP29590 882 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 SHC2P98077 582 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FANCCQ00597 558 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 DMWDQ09019 674 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PSMD2Q13200 908 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 LETM2Q2VYF4 491 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 MAP7D1Q3KQU3 841 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 TAS1R3Q7RTX0 852 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FCHSD1Q86WN1 690 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 LINC00528Q8N1L1 170 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 MEIOBQ8N635 442 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PJA1Q8NG27 643 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 GPR152Q8TDT2 470 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 EPS8L1Q8TE68 723 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 AUTS2Q8WXX7 1259 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 NANOS1Q8WY41 292 aaKnown RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 MTMR8Q96EF0 704 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FOXQ1Q9C009 403 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 TMEM117Q9H0C3 514 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 SLKQ9H2G2 1235 aaPredicted RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ELAC1Q9H777 363 aaKnown RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ZFAND3Q9H8U3 227 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ATP6V0A4Q9HBG4 840 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ANO2Q9NQ90 1003 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 CYLDQ9NQC7 956 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ARHGEF3Q9NR81 526 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 TMEM161AQ9NX61 479 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 RTEL1Q9NZ71 1219 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 FBXO4Q9UKT5 387 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ANGPTL2Q9UKU9 493 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 SMG5Q9UPR3 1016 aaKnown RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 NOC2LQ9Y3T9 749 aaKnown RBP5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PCDHGA2Q9Y5H1 932 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 PCDHA2Q9Y5H9 948 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 IRAK3Q9Y616 596 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 NAV2Q8IVL1 2488 aa5.55□□□□□ -1.52
NPIPB4-219ENST00000543660 DENND3A2RUS2 1198 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 NT5C1B-RDH14C9J2C7 533 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 GCOM1H8Y6P7 765 aaPredicted RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 M0QZ92 97 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 TBC1D4O60343 1298 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ATP9AO75110 1047 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 PEX14O75381 377 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 RPS6KA5O75582 802 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 PROS1P07225 676 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 FBXO45P0C2W1 286 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 POLR2MP0CAP2 368 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 KCNA2P16389 499 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 STARD6P59095 220 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 CSTF1Q05048 431 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DSC3Q14574 896 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 WTAPQ15007 396 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DCLRE1AQ6PJP8 1040 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 C15orf39Q6ZRI6 1047 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 CABP7Q86V35 215 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 LRRC43Q8N309 656 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 STAG2Q8N3U4 1231 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 NME8Q8N427 588 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 SVOPQ8N4V2 548 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 NETO1Q8TDF5 533 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 TRAPPC12Q8WVT3 735 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ATRIPQ8WXE1 791 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 SEPT1Q8WYJ6 367 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 GLG1Q92896 1179 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 PCYT2Q99447 389 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ZKSCAN3Q9BRR0 538 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 RBCK1Q9BYM8 510 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ZBP1Q9H171 429 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 SMARCAD1Q9H4L7 1026 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 SFXN1Q9H9B4 322 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DNAAF2Q9NVR5 837 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 ZSCAN32Q9NX65 697 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 EPS15L1Q9UBC2 864 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DNMT3LQ9UJW3 386 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 PRKAB1Q9Y478 270 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DMXL2Q8TDJ6 3036 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms