RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 POLR3FQ9H1D9 316 aaPredicted RBP7.93□□□□□ -1.14
NUP43-206ENST00000543637 TMEM60Q9H2L4 133 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 MINDY3Q9H8M7 445 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 XPNPEP1Q9NQW7 623 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 MRPL17Q9NRX2 175 aaKnown RBP7.93□□□□□ -1.14
NUP43-206ENST00000543637 PRMT7Q9NVM4 692 aaPredicted RBP7.93□□□□□ -1.14
NUP43-206ENST00000543637 KCNG1Q9UIX4 513 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 DNM3Q9UQ16 869 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 GIT1Q9Y2X7 761 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 USP15Q9Y4E8 981 aaPredicted RBP7.93□□□□□ -1.14
NUP43-206ENST00000543637 IPPQ9Y573 584 aa7.93□□□□□ -1.14
NUP43-206ENST00000543637 MTCL1Q9Y4B5 1905 aaKnown RBP7.93□□□□□ -1.14
NUP43-206ENST00000543637 FAM86C2PA6NEL3 165 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 C2orf71A6NGG8 1288 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 N4BP3O15049 544 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 CLASP2O75122 1294 aaKnown RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 MED24O75448 989 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 DDHD2O94830 711 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 NPTXRO95502 500 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 GLP2RO95838 553 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 SPATA31C1P0DKV0 1188 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 ARF4P18085 180 aaPredicted RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 LIG1P18858 919 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 GLRA2P23416 452 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 U2AF2P26368 475 aaKnown RBP eCLIP7.92□□□□□ -1.14
NUP43-206ENST00000543637 SLC11A1P49279 550 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 EFNA5P52803 228 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 PTGDRQ13258 359 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 PRPF4BQ13523 1007 aaKnown RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 CAPSQ13938 189 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 CBX2Q14781 532 aaPredicted RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 MAPK6Q16659 721 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 C8orf34Q49A92 452 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 UBXN11Q5T124 520 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 CABP7Q86V35 215 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 ZNF280BQ86YH2 543 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 SMG8Q8ND04 991 aaKnown RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 DEPTORQ8TB45 409 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 KIFAP3Q92845 792 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 KHSRPQ92945 711 aaKnown RBP eCLIP7.92□□□□□ -1.14
NUP43-206ENST00000543637 CDK5RAP3Q96JB5 506 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 MFSD14AQ96MC6 490 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 NECTIN4Q96NY8 510 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 APOL5Q9BWW9 433 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 ZBP1Q9H171 429 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 DZANK1Q9NVP4 752 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 DNAJB4Q9UDY4 337 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 SMC3Q9UQE7 1217 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.92□□□□□ -1.14
NUP43-206ENST00000543637 HCFC2Q9Y5Z7 792 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 IRAK3Q9Y616 596 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
NUP43-206ENST00000543637 A0A1B0GUA9 196 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 ARL5CA6NH57 179 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 MEIS3P2A8K0S8 358 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 LOC730098B7Z3J9 87 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 K7ERI5 159 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 WNT7AO00755 349 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 TADA2AO75478 443 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 SSBP05455 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP43-206ENST00000543637 URODP06132 367 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 CYP11B2P19099 503 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 NAMPTP43490 491 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 FXR2P51116 673 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP43-206ENST00000543637 MBTD1Q05BQ5 628 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 ST3GAL1Q11201 340 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 KCNC3Q14003 757 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 RILPL1Q5EBL4 403 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 HERC4Q5GLZ8 1057 aaPredicted RBP7.91□□□□□ -1.14
NUP43-206ENST00000543637 RARS2Q5T160 578 aaKnown RBP7.91□□□□□ -1.14
NUP43-206ENST00000543637 PLCD3Q8N3E9 789 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 SNX29Q8TEQ0 813 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 AUTS2Q8WXX7 1259 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 EDAQ92838 391 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 GAD1Q99259 594 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 KIF2CQ99661 725 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 EIF2AQ9BY44 585 aaKnown RBP7.91□□□□□ -1.14
NUP43-206ENST00000543637 S1PR5Q9H228 398 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 ADAM7Q9H2U9 754 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
NUP43-206ENST00000543637 MUTYHQ9UIF7 546 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
NUP43-206ENST00000543637 TRIP11Q15643 1979 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PHLPP2Q6ZVD8 1323 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 CCDC169A6NNP5 214 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 C2CD2LO14523 706 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 SOD2P04179 222 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PRKCBP05771 671 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 THP07101 528 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 ADH1AP07327 375 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 AKAP5P24588 427 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 GJB2P29033 226 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 MLH1P40692 756 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PRPHP41219 470 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 GLUD2P49448 558 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 SCNN1GP51170 649 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 GRIK3Q13003 919 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms