RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CNOT8Q9UFF9 292 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 TMEM127O75204 238 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ITGA4P13612 1032 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PMLP29590 882 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 TFDP2Q14188 446 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 GKAP1Q5VSY0 366 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 BTBD8Q5XKL5 378 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SPATA24Q86W54 205 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 FBXL13Q8NEE6 735 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 MOV10L1Q9BXT6 1211 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 FRMD3A2A2Y4 597 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 TRIM49BA6NDI0 452 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 TROVE2P10155 538 aaKnown RBP eCLIP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 COG7P83436 770 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 IQCB1Q15051 598 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PTPN21Q16825 1174 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 WDR72Q3MJ13 1102 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ENOSF1Q7L5Y1 443 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 TXNRD3Q86VQ6 643 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SPATA2LQ8IUW3 424 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PCSK9Q8NBP7 692 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SPDYE1Q8NFV5 336 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 UHMK1Q8TAS1 419 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 CCHCR1Q8TD31 782 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 HDAC11Q96DB2 347 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 MAP3K14Q99558 947 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 KIF2CQ99661 725 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 C11orf70Q9BRQ4 267 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ALDH8A1Q9H2A2 487 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 NHEJ1Q9H9Q4 299 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SLC38A7Q9NVC3 462 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ANAPC7Q9UJX3 599 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ITSN1Q15811 1721 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 MOCS2O96007 188 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 GNA15P30679 374 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PRCPP42785 496 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 RAD51Q06609 339 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 CEP85LQ5SZL2 805 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PDCD6IPQ8WUM4 868 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 GPRASP2Q96D09 838 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 RMDN2Q96LZ7 410 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 EFCC1Q9HA90 598 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ENC1O14682 589 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 RNF40O75150 1001 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PPARDQ03181 441 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 RNF168Q8IYW5 571 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DPF2Q92785 391 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 EXOC4Q96A65 974 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 MCUR1Q96AQ8 359 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 KCNH7Q9NS40 1196 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 SPTLC3Q9NUV7 552 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PPP1R9AQ9ULJ8 1098 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 AGAP1Q9UPQ3 857 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PRRG1O14668 218 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TIPRLO75663 272 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 FTCDO95954 541 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 NMT1P30419 496 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 RWDD2BP57060 319 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 RBP5P82980 135 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 GUCY2DQ02846 1103 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 EFCAB12Q6NXP0 572 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TADA2BQ86TJ2 420 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DPF3Q92784 378 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TAAR1Q96RJ0 339 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 AAASQ9NRG9 546 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PRMT7Q9NVM4 692 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 CEP72Q9P209 647 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 SNX9Q9Y5X1 595 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 STAG3L1P0CL83 205 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DMTNQ08495 405 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PSMD6Q15008 389 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 ACCSLQ4AC99 568 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 USP50Q70EL3 339 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 SLC35F6Q8N357 371 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DCLK2Q8N568 766 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 APPL2Q8NEU8 664 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 N4BP2L2Q92802 583 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 NUDCD1Q96RS6 583 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TSPAN18Q96SJ8 248 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 SPON2Q9BUD6 331 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 PHF20Q9BVI0 1012 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 EHD4Q9H223 541 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 KCND2Q9NZV8 630 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 DMGDHQ9UI17 866 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 LCMT1Q9UIC8 334 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 C17orf102A2RUQ5 167 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 POC1B-GALNT4F8VUJ3 575 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 CXCL11O14625 94 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 ZMYND10O75800 440 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 CYBBP04839 570 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TRIM49P0CI25 452 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 TRIM49CP0CI26 452 aa7.35□□□□□ -1.23
SRGAP1-206ENST00000543397 IL1R1P14778 569 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms