RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 HDXQ7Z353 690 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SNX25Q9H3E2 840 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 FAM49BQ9NUQ9 324 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 RNF8O76064 485 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ATP11AP98196 1134 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 DNAJC24Q6P3W2 148 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 DSTYKQ6XUX3 929 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 FRMD5Q7Z6J6 570 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 RSPH3Q86UC2 560 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 TAS1R2Q8TE23 839 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 OSMRQ99650 979 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 PFASO15067 1338 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 E7EVH7 732 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 H3BRB1 525 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 PSMD10O75832 226 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 TBC1D8O95759 1140 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 IFT20Q8IY31 132 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 KAT5Q92993 513 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 BTBD6Q96KE9 485 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ERAP1Q9NZ08 941 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 BTBD7Q9P203 1132 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 MRPL42Q9Y6G3 142 aaKnown RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 EP400Q96L91 3159 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 GALCP54803 685 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 NCOA4Q13772 614 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 WHAMMP3Q1A5X7 153 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 SH3RF1Q7Z6J0 888 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ERICH1Q86X53 443 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 NME8Q8N427 588 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 MGARPQ8TDB4 240 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ACSF2Q96CM8 615 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-208ENST00000542570 RAB20Q9NX57 234 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 RSPH14Q9UHP6 348 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 JRKLQ9Y4A0 524 aa10.9□□□□□ -0.66
TOP3A-208ENST00000542570 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 HLA-DRAP01903 254 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 GNA15P30679 374 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 DLG4P78352 724 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 CACNB2Q08289 660 aaPredicted RBP10.9□□□□□ -0.67
TOP3A-208ENST00000542570 KRT81Q14533 505 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 DUOXA2Q1HG44 320 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 ARSHQ5FYA8 562 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.67
TOP3A-208ENST00000542570 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 HACE1Q8IYU2 909 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 HSPH1Q92598 858 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 DNAJC19Q96DA6 116 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 ZMYND15Q9H091 742 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 ZFYVE28Q9HCC9 887 aa10.9□□□□□ -0.67
TOP3A-208ENST00000542570 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.67
TOP3A-208ENST00000542570 MTRF1LQ9UGC7 380 aaKnown RBP10.9□□□□□ -0.67
TOP3A-208ENST00000542570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 PGK1P00558 417 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 ETNPPLQ8TBG4 499 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 PPANQ9NQ55 473 aaKnown RBP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 APEX2Q9UBZ4 518 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 GLTPD2A6NH11 291 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SOX5P35711 763 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SLC12A3P55017 1021 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 PPATQ06203 517 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 GPR161Q8N6U8 529 aaKnown RBP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 GMLQ99445 158 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 HES2Q9Y543 173 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 AHDC1Q5TGY3 1603 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 IGKV6D-41A0A0C4DH26 115 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA6BA6NDN3 693 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 CCNE2O96020 404 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 PON1P27169 355 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 KRT71Q3SY84 523 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 TATDN2Q93075 761 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 TTC7AQ9ULT0 858 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-208ENST00000542570 SDK1Q7Z5N4 2213 aa10.89□□□□□ -0.67
TOP3A-208ENST00000542570 LDHAP00338 332 aaKnown RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 OAS2P29728 719 aaKnown RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CLCN6P51797 869 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 BPIFB4P59827 614 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 MFSD14CQ5VZR4 134 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms