RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TSG101Q99816 390 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 ADPGKQ9BRR6 497 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 NAT10Q9H0A0 1025 aaKnown RBP25.3■■□□□ 1.64
HOMER3-205ENST00000542541 KCTD10Q9H3F6 313 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 BICDL2A1A5D9 508 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 CSF2RAP15509 400 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 CCNE1P24864 410 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 ERCC5P28715 1186 aaPredicted RBP25.3■■□□□ 1.64
HOMER3-205ENST00000542541 PAK1Q13153 545 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 CENPPQ6IPU0 288 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 DEFB128Q7Z7B8 93 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 DBF4BQ8NFT6 615 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 P2RX5Q93086 422 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 CPB2Q96IY4 423 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 USP20Q9Y2K6 914 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 TTLL13PA6NNM8 815 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 CLDN3O15551 220 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 TGFB1I1O43294 461 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 CALUO43852 315 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-205ENST00000542541 EDN1P05305 212 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 LRRC63Q05C16 580 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 PPIGQ13427 754 aaKnown RBP eCLIP25.29■■□□□ 1.648e-7■■■■□ 26.1
HOMER3-205ENST00000542541 NELFBQ8WX92 580 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 LBHD1Q9BQE6 289 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-205ENST00000542541 FUCA2Q9BTY2 467 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 TRAF3IP3Q9Y228 551 aa25.29■■□□□ 1.64
HOMER3-205ENST00000542541 ZMYM2Q9UBW7 1377 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 SYN1P17600 705 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 MATR3P43243 847 aaKnown RBP eCLIP25.28■■□□□ 1.64
HOMER3-205ENST00000542541 FPGSQ05932 587 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 SLC27A1Q6PCB7 646 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 FOXR2Q6PJQ5 311 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 MPZL3Q6UWV2 235 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 BADQ92934 168 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 SEMA6BQ9H3T3 888 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 PDZD7Q9H5P4 517 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 PTPRHQ9HD43 1115 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 RWDD2AQ9UIY3 292 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 ZMYND8Q9ULU4 1186 aaPredicted RBP25.28■■□□□ 1.64
HOMER3-205ENST00000542541 STYXL1Q9Y6J8 313 aa25.28■■□□□ 1.64
HOMER3-205ENST00000542541 ANKRD63C9JTQ0 380 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 CAVIN2O95810 425 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 GARTP22102 1010 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 TWF2Q6IBS0 349 aaKnown RBP25.27■■□□□ 1.64
HOMER3-205ENST00000542541 CNKSR3Q6P9H4 555 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 POMGNT1Q8WZA1 660 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 AGPAT3Q9NRZ7 376 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 ANKFY1Q9P2R3 1169 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 CTNND2Q9UQB3 1225 aa25.27■■□□□ 1.64
HOMER3-205ENST00000542541 KIAA0391O15091 583 aaKnown RBP25.26■■□□□ 1.63
HOMER3-205ENST00000542541 PROZP22891 400 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 RPL13P26373 211 aaKnown RBP25.26■■□□□ 1.63
HOMER3-205ENST00000542541 EDRF1Q3B7T1 1238 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 ZNF568Q3ZCX4 644 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 ARMCX5Q6P1M9 558 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 ADAM2Q99965 735 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 IKZF4Q9H2S9 585 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 TMX1Q9H3N1 280 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 IL23AQ9NPF7 189 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 MCF2P10911 925 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 ZNF445P59923 1031 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 MCL1Q07820 350 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 IKBKEQ14164 716 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 MYBPC2Q14324 1141 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 HSP90AA2PQ14568 343 aaPredicted RBP25.26■■□□□ 1.63
HOMER3-205ENST00000542541 DSC3Q14574 896 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 DCAF4L1Q3SXM0 396 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 ANO6Q4KMQ2 910 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 SLC39A4Q6P5W5 647 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 LRSAM1Q6UWE0 723 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 C12orf56Q8IXR9 622 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 TRAIPQ9BWF2 469 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 TRIM6Q9C030 488 aaPredicted RBP25.26■■□□□ 1.63
HOMER3-205ENST00000542541 DNAJC25Q9H1X3 360 aa25.26■■□□□ 1.63
HOMER3-205ENST00000542541 TANC1Q9C0D5 1861 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 NOLC1Q14978 699 aaKnown RBP eCLIP25.25■■□□□ 1.63
HOMER3-205ENST00000542541 NFIL3Q16649 462 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 ZCWPW2Q504Y3 356 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 EEF1DP3Q658K8 133 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 ANKRD40Q6AI12 368 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 CDR2LQ86X02 465 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-205ENST00000542541 TMEM174Q8WUU8 243 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 ZBTB45Q96K62 511 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-205ENST00000542541 SIP14410 1827 aa25.25■■□□□ 1.63
HOMER3-205ENST00000542541 A0A0B4J269 797 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 TISP43B9A030 160 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 CLIC2O15247 247 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 SKIP12755 728 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 ACTN1P12814 892 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 ADSSP30520 456 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 RAB27AP51159 221 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 ZBTB33Q86T24 672 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 MSTO1Q9BUK6 570 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 TSPYL2Q9H2G4 693 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-205ENST00000542541 RGS18Q9NS28 235 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 C1orf112Q9NSG2 853 aa25.24■■□□□ 1.63
HOMER3-205ENST00000542541 AGO2Q9UKV8 859 aaKnown RBP25.24■■□□□ 1.63
HOMER3-205ENST00000542541 ABLIM1O14639 778 aa25.23■■□□□ 1.63
HOMER3-205ENST00000542541 LDHAP00338 332 aaKnown RBP25.23■■□□□ 1.63
HOMER3-205ENST00000542541 STX17P56962 302 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms