RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 YEATS4O95619 227 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 PLS3P13797 630 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 LIG1P18858 919 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 DDIT3P35638 169 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 TXLNAP40222 546 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 ALDH7A1P49419 539 aaKnown RBP22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 RAD51AP2Q09MP3 1159 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 PKP1Q13835 747 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 CDR2LQ86X02 465 aaPredicted RBP22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 SPIRE2Q8WWL2 714 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 HLA-CQ95604 372 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 RNF39Q9H2S5 420 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 PDZD7Q9H5P4 517 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 KMT5AQ9NQR1 393 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 SPG21Q9NZD8 308 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 ARHGAP28Q9P2N2 729 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 LZTS1Q9Y250 596 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 HES2Q9Y543 173 aa22.13■■□□□ 1.13
CACNA2D4-215ENST00000542340 SPTLC2O15270 562 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 INPPL1O15357 1258 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 PPP6R2O75170 966 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 BCAR1P56945 870 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 RNASELQ05823 741 aaKnown RBP22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 MCM6Q14566 821 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 TMEM132AQ24JP5 1023 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 TCEAL5Q5H9L2 206 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 ATL3Q6DD88 541 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 GPBP1Q86WP2 473 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 LARP4BQ92615 738 aaKnown RBP22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 NXF3Q9H4D5 531 aaKnown RBP22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 STK17AQ9UEE5 414 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 PUF60Q9UHX1 559 aaKnown RBP22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 ODF2LQ9ULJ1 636 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 GIT1Q9Y2X7 761 aa22.12■■□□□ 1.13
CACNA2D4-215ENST00000542340 EDN1P05305 212 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 AFF1P51825 1210 aaKnown RBP22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 SMTNP53814 917 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 KRT17Q04695 432 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 DHX8Q14562 1220 aaKnown RBP22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 NT5DC1Q5TFE4 455 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 SLC39A11Q8N1S5 342 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 MRPS27Q92552 414 aaKnown RBP22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 ADPGKQ9BRR6 497 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 NRDE2Q9H7Z3 1164 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 LARSQ9P2J5 1176 aaKnown RBP22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 MYO7AQ13402 2215 aa22.11■■□□□ 1.13
CACNA2D4-215ENST00000542340 NPHP3-ACAD11A0A0J9YXS1 232 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 ARL5CA6NH57 179 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 SLC16A4O15374 487 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 NCK2O43639 380 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 ZC3H11AO75152 810 aaKnown RBP eCLIP22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 PBX3P40426 434 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 MRPS5P82675 430 aaKnown RBP22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 AAK1Q2M2I8 961 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 ATF7IP2Q5U623 682 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 RRAGBQ5VZM2 374 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 PDE12Q6L8Q7 609 aaKnown RBP22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 GAD1Q99259 594 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 REEP2Q9BRK0 252 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 APOL6Q9BWW8 343 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 TLR9Q9NR96 1032 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 USP20Q9Y2K6 914 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 ZMYM2Q9UBW7 1377 aa22.1■■□□□ 1.13
CACNA2D4-215ENST00000542340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 GALTP07902 379 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 AKAP5P24588 427 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 IRS1P35568 1242 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 MLH1P40692 756 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 GIT2Q14161 759 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 BECN1Q14457 450 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 COL19A1Q14993 1142 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 DCAF4L1Q3SXM0 396 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 CCDC73Q6ZRK6 1079 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 TAS1R3Q7RTX0 852 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 APBB1IPQ7Z5R6 666 aaPredicted RBP22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 ZNF280BQ86YH2 543 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 TMEM161BQ8NDZ6 487 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 PPP2R3CQ969Q6 453 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 FAM193BQ96PV7 902 aaPredicted RBP22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 ASB2Q96Q27 587 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 MRPL4Q9BYD3 311 aaKnown RBP22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 CFAP45Q9UL16 551 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 TNFSF13BQ9Y275 285 aa22.09■■□□□ 1.13
CACNA2D4-215ENST00000542340 NT5C1B-RDH14C9J2C7 533 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 H0YCG3 227 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 DDHD2O94830 711 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 BRD1O95696 1058 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 POMCP01189 267 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 KRT18P05783 430 aaKnown RBP22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 ZNF131P52739 623 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 CACNB1Q02641 598 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 FOXD4L6Q3SYB3 417 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 EEF1DP3Q658K8 133 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 FOXD4L3Q6VB84 417 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 MICAL1Q8TDZ2 1067 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 KCNN1Q92952 543 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 ZFP42Q96MM3 310 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 ACO2Q99798 780 aaKnown RBP22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 TMEM175Q9BSA9 504 aa22.08■■□□□ 1.13
CACNA2D4-215ENST00000542340 GBP3Q9H0R5 595 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms