RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 POLR3FQ9H1D9 316 aaPredicted RBP22.12■■□□□ 1.13
DDX11-220ENST00000542244 NXF3Q9H4D5 531 aaKnown RBP22.12■■□□□ 1.13
DDX11-220ENST00000542244 BRMS1Q9HCU9 246 aa22.12■■□□□ 1.13
DDX11-220ENST00000542244 ANKEF1Q9NU02 776 aa22.12■■□□□ 1.13
DDX11-220ENST00000542244 CACNG4Q9UBN1 327 aa22.12■■□□□ 1.13
DDX11-220ENST00000542244 USP20Q9Y2K6 914 aa22.12■■□□□ 1.13
DDX11-220ENST00000542244 USO1O60763 962 aaKnown RBP22.11■■□□□ 1.13
DDX11-220ENST00000542244 ASGR2P07307 311 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 ITGA4P13612 1032 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 SCNN1GP51170 649 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 SIGLEC14Q08ET2 396 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 IFNLR1Q8IU57 520 aaPredicted RBP22.11■■□□□ 1.13
DDX11-220ENST00000542244 CCDC83Q8IWF9 413 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 CXCL16Q9H2A7 254 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 POLD4Q9HCU8 107 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 FAN1Q9Y2M0 1017 aa22.11■■□□□ 1.13
DDX11-220ENST00000542244 ARL5CA6NH57 179 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 C2CD2LO14523 706 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 GAS2O43903 313 aaKnown RBP22.1■■□□□ 1.13
DDX11-220ENST00000542244 ERLIN2O94905 339 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 BRD1O95696 1058 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 EFEMP2O95967 443 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 AKAP5P24588 427 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 CATSPER3Q86XQ3 398 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 EXOC8Q8IYI6 725 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 KREMEN2Q8NCW0 462 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 GSTCDQ8NEC7 633 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 BSNDQ8WZ55 320 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 B3GALT6Q96L58 329 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 CSRNP2Q9H175 543 aa22.1■■□□□ 1.13
DDX11-220ENST00000542244 CNTNAP2Q9UHC6 1331 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 ALDH2P05091 517 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 EDN1P05305 212 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 OR1G1P47890 313 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 CLCN4P51793 760 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 ITIH3Q06033 890 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 DSC1Q08554 894 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 MXD4Q14582 209 aaPredicted RBP22.09■■□□□ 1.13
DDX11-220ENST00000542244 ZNF174Q15697 407 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 CES5AQ6NT32 575 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 TMEM175Q9BSA9 504 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 KLK14Q9P0G3 267 aa22.09■■□□□ 1.13
DDX11-220ENST00000542244 INPPL1O15357 1258 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 DGAT1O75907 488 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 NPTXRO95502 500 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 NBR1Q14596 966 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 ECM1Q16610 540 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 KIAA1841Q6NSI8 718 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 NOTUMQ6P988 496 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 POTEGQ6S5H5 508 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 FBXL6Q8N531 539 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 FAM193BQ96PV7 902 aaPredicted RBP22.08■■□□□ 1.13
DDX11-220ENST00000542244 KIF2CQ99661 725 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 KMT2EQ8IZD2 1858 aa22.08■■□□□ 1.13
DDX11-220ENST00000542244 KLRC2P26717 231 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 MRE11P49959 708 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 POU5F1BQ06416 359 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 TCF15Q12870 199 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 TRIM29Q14134 588 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 RNF168Q8IYW5 571 aaPredicted RBP22.07■■□□□ 1.12
DDX11-220ENST00000542244 RSPH1Q8WYR4 309 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 DZANK1Q9NVP4 752 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 KANSL3Q9P2N6 904 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 LIMD1Q9UGP4 676 aa22.07■■□□□ 1.12
DDX11-220ENST00000542244 SOD2P04179 222 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 AXLP30530 894 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 MTHFRP42898 656 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 TFDP1Q14186 410 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 ZBTB33Q86T24 672 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 CABP7Q86V35 215 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 TMEM87AQ8NBN3 555 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 NECTIN4Q96NY8 510 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 PAAF1Q9BRP4 392 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 HERC2P3Q9BVR0 1158 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 NR2E1Q9Y466 385 aa22.06■■□□□ 1.12
DDX11-220ENST00000542244 PLXNA3P51805 1871 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 TEX28O15482 410 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 SPATA31D3P0C874 917 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 GIT2Q14161 759 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 BMS1Q14692 1282 aaKnown RBP22.05■■□□□ 1.12
DDX11-220ENST00000542244 ATAT1Q5SQI0 421 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 KIAA0319Q5VV43 1072 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 SPATA31D4Q6ZUB0 917 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 GPR149Q86SP6 731 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 RIPOR3Q96MK2 946 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 GPR62Q9BZJ7 368 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 DBR1Q9UK59 544 aaKnown RBP22.05■■□□□ 1.12
DDX11-220ENST00000542244 LIMCH1Q9UPQ0 1083 aa22.05■■□□□ 1.12
DDX11-220ENST00000542244 ZDBF2Q9HCK1 2354 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 MYO10Q9HD67 2058 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 A0A1B0GUA9 196 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 LRRIQ4A6NIV6 560 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 IGFBP6P24592 240 aaPredicted RBP22.04■■□□□ 1.12
DDX11-220ENST00000542244 C4orf32Q8N8J7 132 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 CNNM3Q8NE01 707 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 CCDC51Q96ER9 411 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 C8orf76Q96K31 380 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 RPS6KC1Q96S38 1066 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 EMILIN2Q9BXX0 1053 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 NFKBIZQ9BYH8 718 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms