RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 RAET1EQ8TD07 263 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 TRAPPC12Q8WVT3 735 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
LDHA-220ENST00000542179 EEF2KMTQ96G04 330 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 BORCS6Q96GS4 357 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 KIFC3Q9BVG8 833 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 C2orf40Q9H1Z8 148 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 SPC25Q9HBM1 224 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 ARMCX3Q9UH62 379 aaPredicted RBP10.11□□□□□ -0.79
LDHA-220ENST00000542179 STYXL1Q9Y6J8 313 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 SIP14410 1827 aa10.11□□□□□ -0.79
LDHA-220ENST00000542179 MBLAC1A4D2B0 266 aaPredicted RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 RCCD1A6NED2 376 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 LRRIQ4A6NIV6 560 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 KIAA0391O15091 583 aaKnown RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 ADAMTS4O75173 837 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 MYL3P08590 195 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 SMIM10L2AP0DMW4 78 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 SMIM10L2BP0DMW5 78 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 ELNP15502 786 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 GARTP22102 1010 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 CST5P28325 142 aaPredicted RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 HOXC8P31273 242 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 ADAM17P78536 824 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 BEX3Q00994 111 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 UBXN1Q04323 297 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 ENPEPQ07075 957 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 STRN3Q13033 797 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 FKBP15Q5T1M5 1219 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 SLFN12LQ6IEE8 588 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 ZPBP2Q6X784 338 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 CCDC186Q7Z3E2 898 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 LRRC71Q8N4P6 559 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 XXYLT1Q8NBI6 393 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 KLHDC9Q8NEP7 349 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 FBXL18Q96ME1 805 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 ERGIC2Q96RQ1 377 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 MTG1Q9BT17 334 aaPredicted RBP10.1□□□□□ -0.79
LDHA-220ENST00000542179 CCDC113Q9H0I3 377 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 IKZF4Q9H2S9 585 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 NDST4Q9H3R1 872 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 FRMD4BQ9Y2L6 1034 aa10.1□□□□□ -0.79
LDHA-220ENST00000542179 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.1□□□□□ -0.79
LDHA-220ENST00000542179 SMIM35A0A1B0GVV1 85 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 ANKRD63C9JTQ0 380 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 EXOC3O60645 756 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 MSCO60682 206 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 C6orf222P0C671 652 aaPredicted RBP10.09□□□□□ -0.79
LDHA-220ENST00000542179 GNAT1P11488 350 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 ADSSP30520 456 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 CASP4P49662 377 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 PTENP60484 403 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 IGBP1P78318 339 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 CEP135Q66GS9 1140 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
LDHA-220ENST00000542179 ARMCX5Q6P1M9 558 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 SLC39A4Q6P5W5 647 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 RHPN2Q8IUC4 686 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 ZBTB8OSQ8IWT0 167 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 FAM186BQ8IYM0 893 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 KIAA0319LQ8IZA0 1049 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 CCDC150Q8NCX0 1101 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 IQCDQ96DY2 449 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 CBWD1Q9BRT8 395 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 NUP58Q9BVL2 599 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 FZD8Q9H461 694 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 KIAA1586Q9HCI6 787 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
LDHA-220ENST00000542179 DDX20Q9UHI6 824 aaKnown RBP10.09□□□□□ -0.79
LDHA-220ENST00000542179 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.09□□□□□ -0.79
LDHA-220ENST00000542179 MYADML2A6NDP7 307 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 TISP43B9A030 160 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 ACKR2O00590 384 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 HNRNPDLO14979 420 aaKnown RBP10.08□□□□□ -0.8
LDHA-220ENST00000542179 SRGAP2CP0DJJ0 459 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 LIG4P49917 911 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 CYP2J2P51589 502 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 CLCN3P51790 818 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 TRIM14Q14142 442 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 MAPK6Q16659 721 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 FAM187BQ17R55 369 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 INTS8Q75QN2 995 aaKnown RBP10.08□□□□□ -0.8
LDHA-220ENST00000542179 ZNF410Q86VK4 478 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 SESTD1Q86VW0 696 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 LRRC8AQ8IWT6 810 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 PCSK9Q8NBP7 692 aaKnown RBP10.08□□□□□ -0.8
LDHA-220ENST00000542179 SLC35C1Q96A29 364 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms