RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
CPSF7-220ENST00000541963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPSF7-220ENST00000541963 CATSPERZQ9NTU4 200 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 ZBTB40Q9NUA8 1239 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 PCMTD2Q9NV79 361 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 ABCF2Q9UG63 623 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
CPSF7-220ENST00000541963 FITM1A5D6W6 292 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 TCP10L2B9ZVM9 353 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 UBE2Q2LH0YL09 131 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ARVCFO00192 962 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ARNTLO00327 626 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 MAP4K4O95819 1239 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 FUT4P22083 530 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 DNM2P50570 870 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 CORO7P57737 925 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 PRKG1Q13976 671 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ZNF460Q14592 562 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 PLCL1Q15111 1095 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 CRY1Q16526 586 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 RALGPS1Q5JS13 557 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ZNF574Q6ZN55 896 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 FAM83AQ86UY5 434 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 CABP7Q86V35 215 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 CLASRPQ8N2M8 674 aaKnown RBP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 LZTR1Q8N653 840 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 SPATA5Q8NB90 893 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 OR2W6PQ8NHA6 318 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 PCDH19Q8TAB3 1148 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 USP7Q93009 1102 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 KIF1BPQ96EK5 621 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 NOL10Q9BSC4 688 aaKnown RBP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 GULP1Q9UBP9 304 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 SCAF8Q9UPN6 1271 aaKnown RBP6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ZKSCAN5Q9Y2L8 839 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 ATP8A1Q9Y2Q0 1164 aa6.47□□□□□ -1.37
CPSF7-220ENST00000541963 MYH13Q9UKX3 1938 aa6.46□□□□□ -1.37
CPSF7-220ENST00000541963 ZNF646O15015 1829 aaPredicted RBP6.46□□□□□ -1.37
CPSF7-220ENST00000541963 C22orf46C9J442 243 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-220ENST00000541963 FUCA1P04066 466 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 IFIT2P09913 472 aaKnown RBP6.46□□□□□ -1.38
CPSF7-220ENST00000541963 GNAT1P11488 350 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 PRDX5P30044 214 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 CD97P48960 835 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 INHBEP58166 350 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 KIF23Q02241 960 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-220ENST00000541963 MBLAC2Q68D91 279 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 APOBEC3HQ6NTF7 200 aaKnown RBP6.46□□□□□ -1.38
CPSF7-220ENST00000541963 C16orf59Q7L2K0 433 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 RNF180Q86T96 592 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 KIF18BQ86Y91 864 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 IGSF22Q8N9C0 903 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 JMJD8Q96S16 334 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 G6PC3Q9BUM1 346 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 CCDC8Q9H0W5 538 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-220ENST00000541963 IPPKQ9H8X2 491 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 RAI14Q9P0K7 980 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 HMG20BQ9P0W2 317 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 ADGRE2Q9UHX3 823 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 EXOC6BQ9Y2D4 811 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 NUB1Q9Y5A7 615 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 PCDHAC2Q9Y5I4 1007 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 ECM29Q5VYK3 1845 aa6.46□□□□□ -1.38
CPSF7-220ENST00000541963 PAPPA2Q9BXP8 1791 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 KIAA1324LA8MWY0 1029 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-220ENST00000541963 FOXN1O15353 648 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 GAS7O60861 476 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 DGKIO75912 1065 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 MED26O95402 600 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 BAG3O95817 575 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 SPINK2P20155 84 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 ARL4AP40617 200 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 SREBF2Q12772 1141 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 STRN3Q13033 797 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPSF7-220ENST00000541963 DHCR24Q15392 516 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 HSF5Q4G112 596 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-220ENST00000541963 OTUD7BQ6GQQ9 843 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 CDC42EP5Q6NZY7 148 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 TMED8Q6PL24 325 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-220ENST00000541963 MOB2Q70IA6 237 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 SLCO6A1Q86UG4 719 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 AACSQ86V21 672 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 NUP43Q8NFH3 380 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 FAM151AQ8WW52 585 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 ASIC4Q96FT7 647 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 CELF4Q9BZC1 486 aaKnown RBP6.45□□□□□ -1.38
CPSF7-220ENST00000541963 EPB41L1Q9H4G0 881 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 PDLIM7Q9NR12 457 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 IMPACTQ9P2X3 320 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 COQ6Q9Y2Z9 468 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms