RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SCFD1Q8WVM8 642 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 OSBPL7Q9BZF2 842 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 LRRC27Q9C0I9 530 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 GABRQQ9UN88 632 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 MED24O75448 989 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 HNRNPH3P31942 346 aaKnown RBP15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 PTK2Q05397 1052 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 ITGB3BPQ13352 177 aaPredicted RBP15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 KCTD2Q14681 263 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 LY6KQ17RY6 165 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 KIF9Q9HAQ2 790 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 MANSC4A6NHS7 340 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 ARIH2O95376 493 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 ABCB4P21439 1286 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PDIA5Q14554 519 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 ZNF662Q6ZS27 426 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 FUKQ8N0W3 1084 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 DDX47Q9H0S4 455 aaKnown RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 RAD51CO43502 376 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 GCFC2P16383 781 aaKnown RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 MYO1EQ12965 1108 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PAK2Q13177 524 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PPP1R7Q15435 360 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 HIBCHQ6NVY1 386 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PPP1R18Q6NYC8 613 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 SFR1Q86XK3 245 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 KSR1Q8IVT5 923 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 RDH13Q8NBN7 331 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 MDM1Q8TC05 714 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 CASKIN2Q8WXE0 1202 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 ZBTB10Q96DT7 871 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 CYFIP2Q96F07 1278 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 TRIM6Q9C030 488 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PIK3CDO00329 1044 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 GCNT3O95395 438 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 EZRP15311 586 aaKnown RBP15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 KCNA1Q09470 495 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 SLC18A3Q16572 532 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 EMBQ6PCB8 327 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 MICALCLQ6ZW33 695 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PNMA3Q9UL41 463 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 PLAAQ9Y263 795 aa15.47■□□□□ 0.07
SFSWAP-210ENST00000541286 SMIM23A6NLE4 172 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 RASSF9O75901 435 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 MDH1P40925 334 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 SMTNP53814 917 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 CEP55Q53EZ4 464 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 DPP9Q86TI2 863 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 PIGOQ8TEQ8 1089 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 SPDL1Q96EA4 605 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 STAMBPL1Q96FJ0 436 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 DPH5Q9H2P9 285 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 LRRC4CQ9HCJ2 640 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 WRAP73Q9P2S5 460 aaPredicted RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 hCG_1984214I3L0E3 225 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 MYBP10242 640 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 CYP11B2P19099 503 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 CTTNQ14247 550 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 TKFCQ3LXA3 575 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 ZNF713Q8N859 430 aaPredicted RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 U2AF1L4Q8WU68 220 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 UBLCP1Q8WVY7 318 aaPredicted RBP15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 KIAA1217Q5T5P2 1943 aa15.46■□□□□ 0.07
SFSWAP-210ENST00000541286 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 SSU72P8A0A1W2PR75 194 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 GOLGA6L10A6NI86 522 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ADCY6O43306 1168 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 CASP4P49662 377 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ALDH5A1P51649 535 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 PSMD2Q13200 908 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 EXOC3L4Q17RC7 722 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ARMC3Q5W041 872 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 NT5C3AQ9H0P0 336 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 BHMT2Q9H2M3 363 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 GRID2IPA4D2P6 1211 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 BCRP11274 1271 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ELNP15502 786 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 LLGL1Q15334 1064 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 NAB2Q15742 525 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ASTE1Q2TB18 679 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 TMEM119Q4V9L6 283 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ALKBH5Q6P6C2 394 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 C17orf99Q6UX52 265 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ETNPPLQ8TBG4 499 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ZNF577Q9BSK1 485 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 GFPT2O94808 682 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 XRCC5P13010 732 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 MTMR1Q13613 665 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 ZNF571Q7Z3V5 609 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 MCF2L2Q86YR7 1114 aa15.45■□□□□ 0.06
SFSWAP-210ENST00000541286 RNF186Q9NXI6 227 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms