RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 EML1O00423 815 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 TEX28O15482 410 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 N4BP1O75113 896 aaKnown RBP29.94■■■□□ 2.38
CHFR-218ENST00000540963 AXLP30530 894 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 GLUD2P49448 558 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 NPEPPSP55786 919 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 LAMTOR4Q0VGL1 99 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 KIAA0319Q5VV43 1072 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 CCDC51Q96ER9 411 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 VAV3Q9UKW4 847 aa29.94■■■□□ 2.38
CHFR-218ENST00000540963 ZNF292O60281 2723 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 C2CD2LO14523 706 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 SRGAP2CP0DJJ0 459 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 ITGA4P13612 1032 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 GBP2P32456 591 aaPredicted RBP29.93■■■□□ 2.38
CHFR-218ENST00000540963 DSC1Q08554 894 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 NPY5RQ15761 445 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 KRT25Q7Z3Z0 450 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 C4orf19Q8IY42 314 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 SMG8Q8ND04 991 aaKnown RBP29.93■■■□□ 2.38
CHFR-218ENST00000540963 PLEKHA4Q9H4M7 779 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 KCNMB3Q9NPA1 279 aa29.93■■■□□ 2.38
CHFR-218ENST00000540963 NARSO43776 548 aaKnown RBP29.92■■■□□ 2.38
CHFR-218ENST00000540963 NR1I2O75469 434 aa29.92■■■□□ 2.38
CHFR-218ENST00000540963 SRFP11831 508 aa29.92■■■□□ 2.38
CHFR-218ENST00000540963 DSG1Q02413 1049 aa29.92■■■□□ 2.38
CHFR-218ENST00000540963 SLC44A3Q8N4M1 653 aa29.92■■■□□ 2.38
CHFR-218ENST00000540963 TMEM143Q96AN5 459 aa29.92■■■□□ 2.38
CHFR-218ENST00000540963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.92■■■□□ 2.382e-7■■■■□ 26
CHFR-218ENST00000540963 ERLIN2O94905 339 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 GCFC2P16383 781 aaKnown RBP29.91■■■□□ 2.38
CHFR-218ENST00000540963 PPP4R3AQ6IN85 833 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 OTUD6AQ7L8S5 288 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 FERMT3Q86UX7 667 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 ZNF579Q8NAF0 562 aaKnown RBP29.91■■■□□ 2.38
CHFR-218ENST00000540963 RNF149Q8NC42 400 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.91■■■□□ 2.38
CHFR-218ENST00000540963 CHST7Q9NS84 486 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 PRG3Q9Y2Y8 225 aaPredicted RBP29.91■■■□□ 2.38
CHFR-218ENST00000540963 IPPQ9Y573 584 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 ARID2Q68CP9 1835 aa29.91■■■□□ 2.38
CHFR-218ENST00000540963 KRBA1A5PL33 1030 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 ARL5CA6NH57 179 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 CPLX1O14810 134 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 TBX3O15119 743 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 SLC37A4O43826 429 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 CFHP08603 1231 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 OR1G1P47890 313 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 NCBP1Q09161 790 aaKnown RBP29.9■■■□□ 2.38
CHFR-218ENST00000540963 PHLDB3Q6NSJ2 640 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 NOTUMQ6P988 496 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 TAS1R1Q7RTX1 841 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 SMG7Q92540 1137 aaKnown RBP29.9■■■□□ 2.38
CHFR-218ENST00000540963 ZDHHC7Q9NXF8 308 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 WDR87Q6ZQQ6 2873 aa29.9■■■□□ 2.38
CHFR-218ENST00000540963 CACNA1AO00555 2505 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 STK25O00506 426 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 POU5F1BQ06416 359 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 MXD4Q14582 209 aaPredicted RBP29.89■■■□□ 2.38
CHFR-218ENST00000540963 EPHA7Q15375 998 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 INF2Q27J81 1249 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 RSAD2Q8WXG1 361 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 ZNF274Q96GC6 653 aaPredicted RBP29.89■■■□□ 2.38
CHFR-218ENST00000540963 COLEC11Q9BWP8 271 aa29.89■■■□□ 2.38
CHFR-218ENST00000540963 SLKQ9H2G2 1235 aaPredicted RBP29.89■■■□□ 2.38
CHFR-218ENST00000540963 WRAP73Q9P2S5 460 aaPredicted RBP29.89■■■□□ 2.38
CHFR-218ENST00000540963 LMNAP02545 664 aaKnown RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 RFX1P22670 979 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 YWHABP31946 246 aaKnown RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 EMC2Q15006 297 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 CPLX2Q6PUV4 134 aaKnown RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 RUFY3Q7L099 469 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 IFNLR1Q8IU57 520 aaPredicted RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 ZNF707Q96C28 371 aaPredicted RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 MYADMQ96S97 322 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 GAD1Q99259 594 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 NAP1L4Q99733 375 aaKnown RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 FNIP2Q9P278 1114 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 GIT1Q9Y2X7 761 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 EP300Q09472 2414 aaPredicted RBP29.88■■■□□ 2.37
CHFR-218ENST00000540963 ZMYM2Q9UBW7 1377 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 FANCMQ8IYD8 2048 aa29.88■■■□□ 2.37
CHFR-218ENST00000540963 TSPAN1O60635 241 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 RFPL2O75678 378 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 PTENP60484 403 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 CREMQ03060 361 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 TOB2Q14106 344 aaPredicted RBP29.87■■■□□ 2.37
CHFR-218ENST00000540963 NEK8Q86SG6 692 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 HACE1Q8IYU2 909 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 LXNQ9BS40 222 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 NT5C3AQ9H0P0 336 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 CSRNP2Q9H175 543 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 TBC1D17Q9HA65 648 aa29.87■■■□□ 2.37
CHFR-218ENST00000540963 ZFP37Q9Y6Q3 630 aaPredicted RBP29.87■■■□□ 2.37
CHFR-218ENST00000540963 REC8O95072 547 aa29.86■■■□□ 2.37
CHFR-218ENST00000540963 LAMP2P13473 410 aa29.86■■■□□ 2.37
CHFR-218ENST00000540963 MLH1P40692 756 aa29.86■■■□□ 2.37
CHFR-218ENST00000540963 MTRQ99707 1265 aa29.86■■■□□ 2.37
CHFR-218ENST00000540963 EIF2AQ9BY44 585 aaKnown RBP29.86■■■□□ 2.37
CHFR-218ENST00000540963 ZSWIM4Q9H7M6 989 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms