RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 KIAA1217Q5T5P2 1943 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 SYNRGQ9UMZ2 1314 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 BICDL2A1A5D9 508 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 FSD2A1L4K1 749 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 FRMD3A2A2Y4 597 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 RRN3P2A6NIE6 340 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 K7ENM7 598 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 MAGEB2O15479 319 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 CDK11BP21127 795 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 KLRC1P26715 233 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 TMOD1P28289 359 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 NMT1P30419 496 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 GJA8P48165 433 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 DMP1Q13316 513 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 KIAA0753Q2KHM9 967 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 UVSSAQ2YD98 709 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 IER5Q5VY09 327 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 RNF180Q86T96 592 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 CREBRFQ8IUR6 639 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 DHX40Q8IX18 779 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 NELFCDQ8IXH7 590 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 SYCP3Q8IZU3 236 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 GUF1Q8N442 669 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 C7orf31Q8N865 590 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 ARRDC4Q8NCT1 418 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 SLC17A8Q8NDX2 589 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 ENOX1Q8TC92 643 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 TRAPPC12Q8WVT3 735 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 TCP11Q8WWU5 503 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF592Q92610 1267 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 CNTNAP3BQ96NU0 1288 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 INSM2Q96T92 566 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 KATNAL1Q9BW62 490 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 CNTNAP3Q9BZ76 1288 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 POLR3FQ9H1D9 316 aaPredicted RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 DHX33Q9H6R0 707 aaKnown RBP7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 C17orf75Q9HAS0 396 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 RWDD2AQ9UIY3 292 aa7.31□□□□□ -1.24
CLTCL1-206ENST00000540896 MYADML2A6NDP7 307 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 LRRIQ4A6NIV6 560 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 H0YCG3 227 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 IKBKBO14920 756 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SLC16A4O15374 487 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 PRPF6O94906 941 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 FGFR1OPO95684 399 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 ADH1AP07327 375 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SMIM10L2AP0DMW4 78 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SMIM10L2BP0DMW5 78 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 MYBP10242 640 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 MAPTP10636 758 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 GNAT1P11488 350 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 HOXD8P13378 290 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 EN2P19622 333 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 CCNE1P24864 410 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 NPTX2P47972 431 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF131P52739 623 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 RTP1P59025 263 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 EHHADHQ08426 723 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 MAPK7Q13164 816 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 IQCB1Q15051 598 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 GRIK4Q16099 956 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 KCNA10Q16322 511 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 ZC2HC1CQ53FD0 456 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 HSP90AA4PQ58FG1 418 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 FAM47CQ5HY64 1035 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 EFCAB12Q6NXP0 572 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 CXCL17Q6UXB2 119 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF720Q7Z2F6 126 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 HAUS6Q7Z4H7 955 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 DAW1Q8N136 415 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 LRRC71Q8N4P6 559 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 CSGALNACT2Q8N6G5 542 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 KIAA0895Q8NCT3 520 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 GLIS3Q8NEA6 775 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 PRPF31Q8WWY3 499 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 PSPC1Q8WXF1 523 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 P2RX5Q93086 422 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 PCMTD1Q96MG8 357 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SCLT1Q96NL6 688 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 OCSTAMPQ9BR26 566 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 UPF3AQ9H1J1 476 aaKnown RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 XPNPEP1Q9NQW7 623 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 OLFML3Q9NRN5 406 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SETD4Q9NVD3 440 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 FANCLQ9NW38 375 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 SUCLA2Q9P2R7 463 aaPredicted RBP7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 OGDHLQ9ULD0 1010 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 EXOC7Q9UPT5 735 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 COL1A2P08123 1366 aa7.3□□□□□ -1.24
CLTCL1-206ENST00000540896 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms