RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 GTF2BQ00403 316 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 DPY19L2P1Q6NXN4 242 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
LMO3-224ENST00000540848 TRPM4Q8TD43 1214 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
LMO3-224ENST00000540848 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 MAP4K5Q9Y4K4 846 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 HYOU1Q9Y4L1 999 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 PFASO15067 1338 aa11.05□□□□□ -0.64
LMO3-224ENST00000540848 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 ZBTB39O15060 712 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 CLIC2O15247 247 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 EXOC3O60645 756 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 ATP1A1P05023 1023 aaKnown RBP11.04□□□□□ -0.64
LMO3-224ENST00000540848 PSAPP07602 524 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 STAT1P42224 750 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 CASP4P49662 377 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 BFSP1Q12934 665 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 NAB2Q15742 525 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
LMO3-224ENST00000540848 USP37Q86T82 979 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 MCPH1Q8NEM0 835 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 KCNN1Q92952 543 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 CALR3Q96L12 384 aaKnown RBP11.04□□□□□ -0.64
LMO3-224ENST00000540848 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 STK33Q9BYT3 514 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 ADARB2Q9NS39 739 aaKnown RBP11.04□□□□□ -0.64
LMO3-224ENST00000540848 CYP39A1Q9NYL5 469 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
LMO3-224ENST00000540848 SNX12Q9UMY4 172 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 USP20Q9Y2K6 914 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 SSC5DA1L4H1 1573 aa11.04□□□□□ -0.64
LMO3-224ENST00000540848 ERCC3P19447 782 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 ICAM3P32942 547 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 COPB2P35606 906 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 GFPT1Q06210 699 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 KCNA1Q09470 495 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 DMP1Q13316 513 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 TMEM132BQ14DG7 1078 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 NR6A1Q15406 480 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 IRF2BP2Q7Z5L9 587 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 XXYLT1Q8NBI6 393 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 SIX2Q9NPC8 291 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 A0A0G2JMZ2 1700 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 A0A0A6YYK5 440 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 H3BM21 787 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CES2O00748 559 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CCNE2O96020 404 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 KCNA2P16389 499 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 ZSCAN20P17040 1043 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 SLC9A1P19634 815 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CYP2J2P51589 502 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 MYL7Q01449 175 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 LMBR1Q8WVP7 490 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 NTPCRQ9BSD7 190 aaKnown RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
LMO3-224ENST00000540848 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 SLC9A2Q9UBY0 812 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 PPME1Q9Y570 386 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 RIPK3Q9Y572 518 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 CSADQ9Y600 493 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 FHOD1Q9Y613 1164 aa11.03□□□□□ -0.64
LMO3-224ENST00000540848 SBF1O95248 1867 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 WDR81Q562E7 1941 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 KIAA1217Q5T5P2 1943 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 ENC1O14682 589 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 BACH1O14867 736 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 KIAA0391O15091 583 aaKnown RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 SOX5P35711 763 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 PAFAH1B1P43034 410 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 NPEPPSP55786 919 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 GPS2Q13227 327 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 DGKZQ13574 1117 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 STXBP2Q15833 593 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 KIAA0753Q2KHM9 967 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 LBX2Q6XYB7 198 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
LMO3-224ENST00000540848 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
LMO3-224ENST00000540848 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms