RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ASPHQ12797 758 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 PCNX4Q63HM2 1172 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 PLA2G4FQ68DD2 849 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 LRRC8AQ8IWT6 810 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 HSPH1Q92598 858 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
COLCA1-204ENST00000540738 ZWILCHQ9H900 591 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 UBQLN1Q9UMX0 589 aaKnown RBP15.19■□□□□ 0.02
COLCA1-204ENST00000540738 CARNS1A5YM72 827 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 TJP3O95049 919 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 INHBAP08476 426 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 PMLP29590 882 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 VGLL4Q14135 290 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 SEPT6Q14141 434 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 LRG1P02750 347 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 SAT1P21673 171 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
COLCA1-204ENST00000540738 MICALL1Q8N3F8 863 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 DPH5Q9H2P9 285 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 TRPC7Q9HCX4 862 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 CYP26B1Q9NR63 512 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 FAM8A1Q9UBU6 413 aa15.19■□□□□ 0.02
COLCA1-204ENST00000540738 VWA5AO00534 786 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 GPC5P78333 572 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 SLC4A9Q96Q91 983 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PXMP2Q9NR77 195 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 FAM114A2Q9NRY5 505 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 TMEM39AQ9NV64 488 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 MIF4GDA9UHW6 222 aaKnown RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 SHMT1P34896 483 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 CASP7P55210 303 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ETF1P62495 437 aaKnown RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 NAA35Q5VZE5 725 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ZNF512Q96ME7 567 aaPredicted RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 VPS18Q9P253 973 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 MOSPD1Q9UJG1 213 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PAMP19021 973 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 CYP11B2P19099 503 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ADORA2AP29274 412 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 BASP1P80723 227 aaKnown RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 RPUSD2Q8IZ73 545 aaKnown RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 KRT7P08729 469 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PHLDB2Q86SQ0 1253 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 IFT43Q96FT9 208 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PANX2Q96RD6 677 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 C11orf70Q9BRQ4 267 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PITPNM2Q9BZ72 1349 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 NPTXRO95502 500 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 PTPRAP18433 802 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 SREBF1P36956 1147 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 TPD52P55327 224 aaPredicted RBP15.18■□□□□ 0.02
COLCA1-204ENST00000540738 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
COLCA1-204ENST00000540738 CIB2O75838 187 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 CTNNA1P35221 906 aaKnown RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 DRP2Q13474 957 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 TAF2Q6P1X5 1199 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 HTATIP2Q9BUP3 242 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 MAGEB5Q9BZ81 275 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 TACC3Q9Y6A5 838 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 EFCAB8A8MWE9 144 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 H3BRJ5 948 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 MOCS2O96007 188 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 IQCB1Q15051 598 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 RAPH1Q70E73 1250 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 PDCD2LQ9BRP1 358 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SP110Q9HB58 689 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 FNDC3AQ9Y2H6 1198 aaKnown RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 RRP9O43818 475 aaKnown RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SDCCAG8Q86SQ7 713 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 PASD1Q8IV76 773 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 C7orf25Q9BPX7 421 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 PCDHB12Q9Y5F1 795 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 ADCY3O60266 1144 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 ELAVL2Q12926 359 aaKnown RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 IQSEC1Q6DN90 963 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SYTL5Q8TDW5 730 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-204ENST00000540738 SLITRK1Q96PX8 696 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 MED15Q96RN5 788 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 IP6K2Q9UHH9 426 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
COLCA1-204ENST00000540738 ODC1P11926 461 aa15.16■□□□□ 0.02
COLCA1-204ENST00000540738 ACOT2P49753 483 aa15.16■□□□□ 0.02
COLCA1-204ENST00000540738 TAF6P49848 677 aa15.16■□□□□ 0.02
COLCA1-204ENST00000540738 SDE2Q6IQ49 451 aa15.16■□□□□ 0.02
COLCA1-204ENST00000540738 ATP6V1E2Q96A05 226 aa15.16■□□□□ 0.02
COLCA1-204ENST00000540738 FBXO2Q9UK22 296 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms