RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 FAM170AA1A519 330 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 GAS7O60861 476 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 RTN2O75298 545 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 CETN1Q12798 172 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 TRAF1Q13077 416 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 ITIH4Q14624 930 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 TTC27Q6P3X3 843 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 ANKS4BQ8N8V4 417 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 P4HA2O15460 535 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 MTA2O94776 668 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 COMTP21964 271 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 SLMAPQ14BN4 828 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 CYP1B1Q16678 543 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 CCDC137Q6PK04 289 aaKnown RBP13.24□□□□□ -0.29
NPC1-202ENST00000540608 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
NPC1-202ENST00000540608 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
NPC1-202ENST00000540608 TMEM174Q8WUU8 243 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 RUNDC3BQ96NL0 473 aa13.24□□□□□ -0.29
NPC1-202ENST00000540608 TACO1Q9BSH4 297 aaKnown RBP13.24□□□□□ -0.29
NPC1-202ENST00000540608 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 CFBP00751 764 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 RARGP13631 454 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 DLG4P78352 724 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 TNFAIP8L3Q5GJ75 292 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 SEL1L2Q5TEA6 688 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 WDR11Q9BZH6 1224 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 TMEM110-MUSTN1A8MSY1 372 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 HIP1RO75146 1068 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 POLR2MP0CAP2 368 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 FKBP1AP62942 108 aaKnown RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 MESDQ14696 234 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
NPC1-202ENST00000540608 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 BANK1Q8NDB2 785 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 CD101Q93033 1021 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 ART4Q93070 314 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 UNC45AQ9H3U1 944 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
NPC1-202ENST00000540608 ARHGEF35A5YM69 484 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 RIPK2O43353 540 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 ATP2C2O75185 946 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 PYGMP11217 842 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 GZMAP12544 262 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
NPC1-202ENST00000540608 ECE1P42892 770 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 VAMP7P51809 220 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 EPC2Q52LR7 807 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 CYFIP1Q7L576 1253 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 DAW1Q8N136 415 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 MTUS1Q9ULD2 1270 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
NPC1-202ENST00000540608 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 B3GNT9Q6UX72 402 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
NPC1-202ENST00000540608 LRRC34Q8IZ02 419 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
NPC1-202ENST00000540608 PCDHB18PQ96TA0 734 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 PRMT1Q99873 361 aaKnown RBP13.22□□□□□ -0.29
NPC1-202ENST00000540608 ZNF577Q9BSK1 485 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
NPC1-202ENST00000540608 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 MGRN1O60291 552 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 GSTA1P08263 222 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 VIL1P09327 827 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 CHRNB2P17787 502 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 STAT2P52630 851 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 AOC3Q16853 763 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 LXNQ9BS40 222 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 ROPN1BQ9BZX4 212 aaPredicted RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 ROPN1Q9HAT0 212 aaPredicted RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 SGPL1O95470 568 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 ARP10275 920 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms