RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 GPRC5CQ9NQ84 441 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 DNAJB4Q9UDY4 337 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 KIAA1024Q9UPX6 916 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 HES2Q9Y543 173 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 IPPQ9Y573 584 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 PLXNA3P51805 1871 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 KMT2EQ8IZD2 1858 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 CNTNAP2Q9UHC6 1331 aa9.99□□□□□ -0.81
LMO3-222ENST00000540445 C2orf71A6NGG8 1288 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 LOC730098B7Z3J9 87 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 NR1I2O75469 434 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 DDHD2O94830 711 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 ARF4P18085 180 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 LIG1P18858 919 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 GJB2P29033 226 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 MCM2P49736 904 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 TOB1P50616 345 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
LMO3-222ENST00000540445 AFF1P51825 1210 aaKnown RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 MBTD1Q05BQ5 628 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 GIT2Q14161 759 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 CBX2Q14781 532 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 HERC4Q5GLZ8 1057 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 DDX53Q86TM3 631 aaKnown RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 C4orf32Q8N8J7 132 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 SMG8Q8ND04 991 aaKnown RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 GAD1Q99259 594 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 EIF2AQ9BY44 585 aaKnown RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 NFKBIZQ9BYH8 718 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 PARP2Q9UGN5 583 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 USP15Q9Y4E8 981 aaPredicted RBP9.98□□□□□ -0.81
LMO3-222ENST00000540445 STK24Q9Y6E0 443 aa9.98□□□□□ -0.81
LMO3-222ENST00000540445 CITO14578 2027 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 A0A1B0GUA9 196 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 ARL5CA6NH57 179 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SPDYE4A6NLX3 237 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 LAD1O00515 517 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 NRP1O14786 923 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 B4GALT5O43286 388 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 NPTXRO95502 500 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
LMO3-222ENST00000540445 CYP11B2P19099 503 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 MUTP22033 750 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 AKAP5P24588 427 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 OR1G1P47890 313 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SLC11A1P49279 550 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 ANKRD54Q6NXT1 300 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SLC27A1Q6PCB7 646 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SYCE2Q6PIF2 218 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 DTHD1Q6ZMT9 781 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 TMEM173Q86WV6 379 aaPredicted RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 RNF135Q8IUD6 432 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SNX29Q8TEQ0 813 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 AUTS2Q8WXX7 1259 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 CASP10Q92851 521 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 IFT74Q96LB3 600 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 S1PR5Q9H228 398 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 BHMT2Q9H2M3 363 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 DDX19AQ9NUU7 478 aaKnown RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 PRMT7Q9NVM4 692 aaPredicted RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 DNM3Q9UQ16 869 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.97□□□□□ -0.81
LMO3-222ENST00000540445 MUC6Q6W4X9 2439 aa9.97□□□□□ -0.81
LMO3-222ENST00000540445 B4GALT3O60512 393 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 CLASP2O75122 1294 aaKnown RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 CD2BP2O95400 341 aaKnown RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 CTSAP10619 480 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 HOXB8P17481 243 aaPredicted RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 CDC25AP30304 524 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 MLH1P40692 756 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 PRPF4BQ13523 1007 aaKnown RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 ECM1Q16610 540 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 MAPK6Q16659 721 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 RILPL1Q5EBL4 403 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 LARP1BQ659C4 914 aaKnown RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 CES5AQ6NT32 575 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 IGSF22Q8N9C0 903 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 ZFP42Q96MM3 310 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 TMEM175Q9BSA9 504 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 PHF7Q9BWX1 381 aaPredicted RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 ZBP1Q9H171 429 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
LMO3-222ENST00000540445 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.82
LMO3-222ENST00000540445 MIOSQ9NXC5 875 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms