RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TOB2Q14106 344 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 TFDP1Q14186 410 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 CWF19L1Q69YN2 538 aaKnown RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 CCDC105Q8IYK2 499 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 NXPE3Q969Y0 559 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 MTRQ99707 1265 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 LXNQ9BS40 222 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 HERC2P3Q9BVR0 1158 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 TRIM6Q9C030 488 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 MINDY3Q9H8M7 445 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 WNT16Q9UBV4 365 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 PRG3Q9Y2Y8 225 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 IPPQ9Y573 584 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 INPPL1O15357 1258 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 TEX28O15482 410 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
COPS7A-211ENST00000540408 PI15O43692 258 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 NPR3P17342 541 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 EMC2Q15006 297 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 ANGPT1Q15389 498 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 SLFN12Q8IYM2 578 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 ADSSL1Q8N142 457 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
COPS7A-211ENST00000540408 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
COPS7A-211ENST00000540408 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 VAV3Q9UKW4 847 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 KCNJ14Q9UNX9 436 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 CACNA1HO95180 2353 aa13.91□□□□□ -0.18
COPS7A-211ENST00000540408 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 C1RP00736 705 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 CFHP08603 1231 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 MLH1P40692 756 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 DSG1Q02413 1049 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 CREMQ03060 361 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 POU5F1BQ06416 359 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 KIAA0319Q5VV43 1072 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 NCAPH2Q6IBW4 605 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 TPH2Q8IWU9 490 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
COPS7A-211ENST00000540408 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
COPS7A-211ENST00000540408 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 GAD1Q99259 594 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 SEMA4AQ9H3S1 761 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 RXFP1Q9HBX9 757 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.18
COPS7A-211ENST00000540408 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.18
COPS7A-211ENST00000540408 RGL1Q9NZL6 768 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 EPS15L1Q9UBC2 864 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 PLXNA3P51805 1871 aa13.9□□□□□ -0.18
COPS7A-211ENST00000540408 CLUHO75153 1309 aa13.9□□□□□ -0.19
COPS7A-211ENST00000540408 TSPAN1O60635 241 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 MYBP10242 640 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 ID4P47928 161 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 SCNN1GP51170 649 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 PTENP60484 403 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 NPY5RQ15761 445 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 ERMP1Q7Z2K6 904 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 SLC44A3Q8N4M1 653 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 CPB2Q96IY4 423 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
COPS7A-211ENST00000540408 APOL6Q9BWW8 343 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 EIF2AQ9BY44 585 aaKnown RBP13.89□□□□□ -0.19
COPS7A-211ENST00000540408 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 MARCH5Q9NX47 278 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
COPS7A-211ENST00000540408 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
COPS7A-211ENST00000540408 NARSO43776 548 aaKnown RBP13.88□□□□□ -0.19
COPS7A-211ENST00000540408 TADA2AO75478 443 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 RFPL2O75678 378 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 DGAT1O75907 488 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 SRFP11831 508 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 DSC1Q08554 894 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms