RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C17orf75Q9HAS0 396 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 TBC1D13Q9NVG8 400 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 PLXNA4Q9HCM2 1894 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 K7ERI5 159 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 CSPG5O95196 566 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 ITGA4P13612 1032 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 LAG3P18627 525 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 GIT2Q14161 759 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 BECN1Q14457 450 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 RRAGBQ5VZM2 374 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 KCNT2Q6UVM3 1135 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 SPIRE2Q8WWL2 714 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 APOL6Q9BWW8 343 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 STK17AQ9UEE5 414 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 PCDHB12Q9Y5F1 795 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 XIRP2A4UGR9 3374 aa20.16■□□□□ 0.82
SNRPA1-203ENST00000540017 FGF18O76093 207 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 AKAP5P24588 427 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 TXLNAP40222 546 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 PTPROQ16827 1216 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 ATL3Q6DD88 541 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 SHC4Q6S5L8 630 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 ZNF280BQ86YH2 543 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 TMEM161BQ8NDZ6 487 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 CNNM3Q8NE01 707 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 MRPL9Q9BYD2 267 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 TRIM6Q9C030 488 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 NRDE2Q9H7Z3 1164 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 AAASQ9NRG9 546 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 MIOSQ9NXC5 875 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 ODF2LQ9ULJ1 636 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 PHLPP2Q6ZVD8 1323 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 MYH11P35749 1972 aa20.15■□□□□ 0.82
SNRPA1-203ENST00000540017 NT5C1B-RDH14C9J2C7 533 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 N4BP3O15049 544 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 CUTAO60888 179 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 DDHD2O94830 711 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 ZNF131P52739 623 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 BCAR1P56945 870 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 TMEM132AQ24JP5 1023 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 THNSL1Q8IYQ7 743 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 PDILTQ8N807 584 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 SLC17A8Q8NDX2 589 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 POF1BQ8WVV4 589 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 ZNF558Q96NG5 402 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 GAD1Q99259 594 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 LMAN2LQ9H0V9 348 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 RCOR1Q9UKL0 485 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 PCDHA7Q9UN72 937 aa20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 RBM19Q9Y4C8 960 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-203ENST00000540017 MYO7AQ13402 2215 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 INPPL1O15357 1258 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 ZC3H11AO75152 810 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 POMCP01189 267 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 MAPTP10636 758 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 IRS1P35568 1242 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 MLH1P40692 756 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 NCKAP1LP55160 1127 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 ATF7IP2Q5U623 682 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 GSTCDQ8NEC7 633 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 ACO2Q99798 780 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 TARS2Q9BW92 718 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 GBP3Q9H0R5 595 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 CXCL16Q9H2A7 254 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 PCDHGC5Q9Y5F6 944 aa20.13■□□□□ 0.81
SNRPA1-203ENST00000540017 MYMKA6NI61 221 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 FAM13AO94988 1023 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 KRT18P05783 430 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 STAT6P42226 847 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 SKIV2LQ15477 1246 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 TCEAL5Q5H9L2 206 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 CCDC73Q6ZRK6 1079 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 DYMQ7RTS9 669 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 TMEM173Q86WV6 379 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 SLC39A11Q8N1S5 342 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 MYCT1Q8N699 235 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 URGCPQ8TCY9 931 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 RSPH1Q8WYR4 309 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 FIZ1Q96SL8 496 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 PTPRHQ9HD43 1115 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 SPG21Q9NZD8 308 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 KLK14Q9P0G3 267 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 LARSQ9P2J5 1176 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 CFAP45Q9UL16 551 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 TNFSF13BQ9Y275 285 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 GIT1Q9Y2X7 761 aa20.12■□□□□ 0.81
SNRPA1-203ENST00000540017 ABLIM1O14639 778 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 GALTP07902 379 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 ME1P48163 572 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 SLC11A1P49279 550 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 SCNN1GP51170 649 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms