RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PIGRP01833 764 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
DDB1-216ENST00000539739 ADSSL1Q8N142 457 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 CCDC51Q96ER9 411 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 CPB2Q96IY4 423 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 ADPGKQ9BRR6 497 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 SYCE3A1L190 88 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 TOM1L1O75674 476 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 CCDC192P0DO97 292 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 HOXA11P31270 313 aaPredicted RBP16.89■□□□□ 0.29
DDB1-216ENST00000539739 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDB1-216ENST00000539739 SNRPFP62306 86 aaKnown RBP16.89■□□□□ 0.29
DDB1-216ENST00000539739 STX1AQ16623 288 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 TWF2Q6IBS0 349 aaKnown RBP16.89■□□□□ 0.29
DDB1-216ENST00000539739 CNKSR3Q6P9H4 555 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 GOLGA5Q8TBA6 731 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 DHTKD1Q96HY7 919 aaPredicted RBP16.89■□□□□ 0.29
DDB1-216ENST00000539739 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
DDB1-216ENST00000539739 TNFSF13BQ9Y275 285 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 TANC1Q9C0D5 1861 aa16.89■□□□□ 0.29
DDB1-216ENST00000539739 EDN1P05305 212 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
DDB1-216ENST00000539739 USP20Q9Y2K6 914 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 SIP14410 1827 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 PPP1R3GB7ZBB8 358 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 PDXKO00764 312 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 CLDN3O15551 220 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
DDB1-216ENST00000539739 ACTN1P12814 892 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 HOXD13P35453 343 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 TYRO3Q06418 890 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 IKBKEQ14164 716 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
DDB1-216ENST00000539739 KLHL10Q6JEL2 608 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 SLC27A1Q6PCB7 646 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 MPZL3Q6UWV2 235 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 TSG101Q99816 390 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 ADAM2Q99965 735 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 TRIM6Q9C030 488 aaPredicted RBP16.88■□□□□ 0.29
DDB1-216ENST00000539739 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
DDB1-216ENST00000539739 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 PDZD7Q9H5P4 517 aa16.88■□□□□ 0.29
DDB1-216ENST00000539739 EFCAB14O75071 495 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
DDB1-216ENST00000539739 CCNE1P24864 410 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 DSC3Q14574 896 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 DPCR1Q3MIW9 517 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 DCAF4L1Q3SXM0 396 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 ZNF568Q3ZCX4 644 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 TAF3Q5VWG9 929 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
DDB1-216ENST00000539739 BICDL2A1A5D9 508 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 ANKRD63C9JTQ0 380 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 ACRP10323 421 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 SKIP12755 728 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 GARTP22102 1010 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 PROZP22891 400 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 PAK1Q13153 545 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
DDB1-216ENST00000539739 CDR2LQ86X02 465 aaPredicted RBP16.86■□□□□ 0.29
DDB1-216ENST00000539739 NELFBQ8WX92 580 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 P2RX5Q93086 422 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 ZBTB45Q96K62 511 aaPredicted RBP16.86■□□□□ 0.29
DDB1-216ENST00000539739 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
DDB1-216ENST00000539739 PTPRHQ9HD43 1115 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 C1orf112Q9NSG2 853 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 CTNND2Q9UQB3 1225 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 STYXL1Q9Y6J8 313 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 ZMYM2Q9UBW7 1377 aa16.86■□□□□ 0.29
DDB1-216ENST00000539739 ABHD14A-ACY1A0A1B0GW23 586 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 MGEA5O60502 916 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 NPTXRO95502 500 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 FGBP02675 491 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 MCF2P10911 925 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 RAB27AP51159 221 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 MCL1Q07820 350 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 NOLC1Q14978 699 aaKnown RBP eCLIP16.85■□□□□ 0.293e-6■■□□□ 12.8
DDB1-216ENST00000539739 EEF1DP3Q658K8 133 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 SLC39A4Q6P5W5 647 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 ZBTB33Q86T24 672 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 MSTO1Q9BUK6 570 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 TRAIPQ9BWF2 469 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 NAT10Q9H0A0 1025 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms