RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMEM134Q9H6X4 195 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 PARVGQ9HBI0 331 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 FAM13BQ9NYF5 915 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 PHLPP2Q6ZVD8 1323 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 EOMESO95936 686 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 EFNA5P52803 228 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 PCBP1Q15365 356 aaKnown RBP eCLIP17.34■□□□□ 0.37
RPAIN-206ENST00000539417 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-206ENST00000539417 IQUBQ8NA54 791 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 GDPD5Q8WTR4 605 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 HPS3Q969F9 1004 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 ZBTB45Q96K62 511 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-206ENST00000539417 TGS1Q96RS0 853 aaKnown RBP17.34■□□□□ 0.37
RPAIN-206ENST00000539417 APOL6Q9BWW8 343 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 CWH43Q9H720 699 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 TYW1Q9NV66 732 aaKnown RBP17.34■□□□□ 0.37
RPAIN-206ENST00000539417 TBC1D7Q9P0N9 293 aa17.34■□□□□ 0.37
RPAIN-206ENST00000539417 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 ABLIM1O14639 778 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 TRAK2O60296 914 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 B4GALT3O60512 393 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 LPXNO60711 386 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 TBCAO75347 108 aaKnown RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 OFD1O75665 1012 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 AKAP5P24588 427 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 EPC2Q52LR7 807 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 ZC2HC1CQ53FD0 456 aaPredicted RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 SLC27A1Q6PCB7 646 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 TMEM192Q8IY95 271 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 FSIP1Q8NA03 581 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 CLP1Q92989 425 aaKnown RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 ACO2Q99798 780 aaKnown RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 MIOSQ9NXC5 875 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.37
RPAIN-206ENST00000539417 LARSQ9P2J5 1176 aaKnown RBP17.33■□□□□ 0.37
RPAIN-206ENST00000539417 PRUNE2Q8WUY3 3088 aa17.33■□□□□ 0.36
RPAIN-206ENST00000539417 FRMD3A2A2Y4 597 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 K7ENM7 598 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 IDEP14735 1019 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 PBX3P40426 434 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 AFMP43652 599 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 CASP5P51878 434 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 CEP120Q8N960 986 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 GLIS3Q8NEA6 775 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 TRIM9Q9C026 710 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 HAPLN2Q9GZV7 340 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 TMEM117Q9H0C3 514 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 PTPRHQ9HD43 1115 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 INPP5FQ9Y2H2 1132 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 RALGAPA2Q2PPJ7 1873 aa17.32■□□□□ 0.36
RPAIN-206ENST00000539417 A0A1W2PQ27 194 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 A0A1W2PQ64 194 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 A0A1W2PQD8 194 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 RAB27AP51159 221 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 NCBP1Q09161 790 aaKnown RBP17.31■□□□□ 0.36
RPAIN-206ENST00000539417 CUL4BQ13620 913 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 TMEM132AQ24JP5 1023 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 ZFP42Q96MM3 310 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 CUEDC2Q9H467 287 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 KLK14Q9P0G3 267 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 MYO9BQ13459 2157 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 TISP43B9A030 160 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 N4BP3O15049 544 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 SLFN14P0C7P3 912 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 SKIP12755 728 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 ITGA4P13612 1032 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 PROZP22891 400 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 CTNNB1P35222 781 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 BMPR1AP36894 532 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 SMTNP53814 917 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 KCNA1Q09470 495 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 ZBTB33Q86T24 672 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
RPAIN-206ENST00000539417 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 GAD1Q99259 594 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 C7orf25Q9BPX7 421 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 STRA6Q9BX79 667 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 CDT1Q9H211 546 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 PANK4Q9NVE7 773 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 SNTG2Q9NY99 539 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 TNFSF13BQ9Y275 285 aa17.31■□□□□ 0.36
RPAIN-206ENST00000539417 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-206ENST00000539417 GADD45BO75293 160 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-206ENST00000539417 PPP1R37O75864 691 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 MYBP10242 640 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 MLH1P40692 756 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 SYKP43405 635 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 COASYQ13057 564 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
RPAIN-206ENST00000539417 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms