RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CASP4P49662 377 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 GJA9P57773 515 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 ZBED6P86452 979 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 BEX3Q00994 111 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 DMP1Q13316 513 aaPredicted RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 TUBB2AQ13885 445 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 BRDTQ58F21 947 aaPredicted RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 DPY19L2P1Q6NXN4 242 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 MAEAQ7L5Y9 396 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 KSR1Q8IVT5 923 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 SLC35C1Q96A29 364 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 TUBB2BQ9BVA1 445 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 UPF3AQ9H1J1 476 aaKnown RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 TUT1Q9H6E5 874 aaKnown RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 GTPBP10A4D1E9 387 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 MYADML2A6NDP7 307 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 H0YCG3 227 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PES1O00541 588 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 CLIC2O15247 247 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 GAS2O43903 313 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 HBP1O60381 514 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PGK1P00558 417 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 F2P00734 622 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 C6orf222P0C671 652 aaPredicted RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 TNNT3P45378 269 aaPredicted RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 KLK7P49862 253 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 SMTNP53814 917 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 POLGP54098 1239 aaPredicted RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 NKX3-2P78367 333 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 CDK17Q00537 523 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 TAS1R3Q7RTX0 852 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 TMTC1Q8IUR5 882 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 RABGGTAQ92696 567 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 POLR3FQ9H1D9 316 aaPredicted RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 ARFGAP3Q9NP61 516 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 KMT5AQ9NQR1 393 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PTPN22Q9Y2R2 807 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 LUC7L2Q9Y383 392 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 EPHB6O15197 1021 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 MAFO75444 373 aaPredicted RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 NOL4O94818 638 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PIGRP01833 764 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 AFPP02771 609 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 TUBBP07437 444 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 INSRRP14616 1297 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 TRIM21P19474 475 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 SOX10P56693 466 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 BRD3Q15059 726 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PPP2R5AQ15172 486 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 WDR59Q6PJI9 974 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 RAD9BQ6WBX8 426 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 REXO1L1PQ8IX06 675 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 FAM186BQ8IYM0 893 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 CPLX3Q8WVH0 158 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 BAP1Q92560 729 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 KAT2BQ92831 832 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 YY1AP1Q9H869 796 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 XPNPEP3Q9NQH7 507 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 AGPAT5Q9NUQ2 364 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 DDX20Q9UHI6 824 aaKnown RBP9.63□□□□□ -0.87
DDB1-213ENST00000539332 TBX20Q9UMR3 447 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 EXOC7Q9UPT5 735 aa9.63□□□□□ -0.87
DDB1-213ENST00000539332 DENND3A2RUS2 1198 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 KPNA6O60684 536 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 ADAMTS4O75173 837 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 MYL3P08590 195 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 GLRA2P23416 452 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 NAMPTP43490 491 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 PURAQ00577 322 aaKnown RBP9.62□□□□□ -0.87
DDB1-213ENST00000539332 ENPEPQ07075 957 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
DDB1-213ENST00000539332 KIAA0753Q2KHM9 967 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 ZNF484Q5JVG2 852 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
DDB1-213ENST00000539332 SLC39A4Q6P5W5 647 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 CYP26C1Q6V0L0 522 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 SYCP3Q8IZU3 236 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 ASAP3Q8TDY4 903 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 TRAPPC12Q8WVT3 735 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 IFT74Q96LB3 600 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 GANQ9H2C0 597 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 HMX1Q9NP08 348 aaPredicted RBP9.62□□□□□ -0.87
DDB1-213ENST00000539332 CEP72Q9P209 647 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 FBXL5Q9UKA1 691 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 PLAGL2Q9UPG8 496 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 PPP2R2CQ9Y2T4 447 aa9.62□□□□□ -0.87
DDB1-213ENST00000539332 COL1A2P08123 1366 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms