RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MED15Q96RN5 788 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 IFIH1Q9BYX4 1025 aaKnown RBP25.74■■□□□ 1.71
TMEM260-202ENST00000538838 PDZD7Q9H5P4 517 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 AGPAT3Q9NRZ7 376 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 PRKAG2Q9UGJ0 569 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 ANKRD40Q6AI12 368 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 HS2ST1Q7LGA3 356 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 PDXKO00764 312 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 CLIC2O15247 247 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 DEFB128Q7Z7B8 93 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 DPF3Q92784 378 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 TSPY26PQ9H489 355 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 RWDD2AQ9UIY3 292 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 TRAF3IP3Q9Y228 551 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 TNFSF13BQ9Y275 285 aa25.73■■□□□ 1.71
TMEM260-202ENST00000538838 TOM1L1O75674 476 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 PARNO95453 639 aaKnown RBP25.72■■□□□ 1.71
TMEM260-202ENST00000538838 ERCC5P28715 1186 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-202ENST00000538838 ADSSP30520 456 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 AXLP30530 894 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 NCBP1Q09161 790 aaKnown RBP25.72■■□□□ 1.71
TMEM260-202ENST00000538838 TTI2Q6NXR4 508 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 CBWD1Q9BRT8 395 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 HAPLN2Q9GZV7 340 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 TMX1Q9H3N1 280 aa25.72■■□□□ 1.71
TMEM260-202ENST00000538838 A0A1B0GUA9 196 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 ABLIM1O14639 778 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 CALUO43852 315 aaPredicted RBP25.71■■□□□ 1.71
TMEM260-202ENST00000538838 CXCL10P02778 98 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 SYN1P17600 705 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 PROZP22891 400 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 MATR3P43243 847 aaKnown RBP eCLIP25.71■■□□□ 1.71
TMEM260-202ENST00000538838 ZNF568Q3ZCX4 644 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 PLEKHG4Q58EX7 1191 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 MFSD5Q6N075 450 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 ARMCX5Q6P1M9 558 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 NOTUMQ6P988 496 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 MPZL3Q6UWV2 235 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 ZBTB33Q86T24 672 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 TSG101Q99816 390 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 PTPRHQ9HD43 1115 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 ZMYND8Q9ULU4 1186 aaPredicted RBP25.71■■□□□ 1.71
TMEM260-202ENST00000538838 MICAL3Q7RTP6 2002 aa25.71■■□□□ 1.71
TMEM260-202ENST00000538838 BICDL2A1A5D9 508 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 N4BP3O15049 544 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 MGEA5O60502 916 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 HARSP12081 509 aaKnown RBP25.7■■□□□ 1.71
TMEM260-202ENST00000538838 CSF2RAP15509 400 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 RFC2P35250 354 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 LRRC63Q05C16 580 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 TCTN1Q2MV58 587 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 CT47A1Q5JQC4 288 aaPredicted RBP25.7■■□□□ 1.71
TMEM260-202ENST00000538838 DBF4BQ8NFT6 615 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 GOLGA5Q8TBA6 731 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 POMGNT1Q8WZA1 660 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 DUSP9Q99956 384 aaKnown RBP25.7■■□□□ 1.71
TMEM260-202ENST00000538838 TCHPQ9BT92 498 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 ANP32EQ9BTT0 268 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 NAT10Q9H0A0 1025 aaKnown RBP25.7■■□□□ 1.71
TMEM260-202ENST00000538838 PCIF1Q9H4Z3 704 aa25.7■■□□□ 1.71
TMEM260-202ENST00000538838 NR3C1P04150 777 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 ZNF165P49910 485 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 NOLC1Q14978 699 aaKnown RBP eCLIP25.7■■□□□ 1.7
TMEM260-202ENST00000538838 TMEM199Q8N511 208 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 VWCEQ96DN2 955 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 CDT1Q9H211 546 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 STYXL1Q9Y6J8 313 aa25.7■■□□□ 1.7
TMEM260-202ENST00000538838 CLDN3O15551 220 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 CYP2J2P51589 502 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 SNRPFP62306 86 aaKnown RBP25.69■■□□□ 1.7
TMEM260-202ENST00000538838 EDRF1Q3B7T1 1238 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 SLC27A1Q6PCB7 646 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 SEPT8Q92599 483 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 EEF2KMTQ96G04 330 aa25.69■■□□□ 1.7
TMEM260-202ENST00000538838 EIF2AQ9BY44 585 aaKnown RBP25.69■■□□□ 1.7
TMEM260-202ENST00000538838 CGNQ9P2M7 1197 aaKnown RBP25.69■■□□□ 1.7
TMEM260-202ENST00000538838 A0A0B4J269 797 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 NPTXRO95502 500 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 GARTP22102 1010 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 NR2F2P24468 414 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 MCL1Q07820 350 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 DSC3Q14574 896 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 UBXN11Q5T124 520 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 TWF2Q6IBS0 349 aaKnown RBP25.68■■□□□ 1.7
TMEM260-202ENST00000538838 SLFN12LQ6IEE8 588 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 C12orf56Q8IXR9 622 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 AOPEPQ8N6M6 819 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 ZSWIM2Q8NEG5 633 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 BADQ92934 168 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 CCDC51Q96ER9 411 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 BPIFA3Q9BQP9 254 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 MSTO1Q9BUK6 570 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 CHST12Q9NRB3 414 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 HSPBP1Q9NZL4 362 aa25.68■■□□□ 1.7
TMEM260-202ENST00000538838 ZSCAN20P17040 1043 aaPredicted RBP25.67■■□□□ 1.7
TMEM260-202ENST00000538838 LINC01599Q8WXQ3 324 aa25.67■■□□□ 1.7
TMEM260-202ENST00000538838 SAAL1Q96ER3 474 aa25.67■■□□□ 1.7
TMEM260-202ENST00000538838 ADPGKQ9BRR6 497 aa25.67■■□□□ 1.7
TMEM260-202ENST00000538838 CBX8Q9HC52 389 aa25.67■■□□□ 1.7
TMEM260-202ENST00000538838 MYL5Q02045 173 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms