RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TMEM134Q9H6X4 195 aa22.14■■□□□ 1.13
DDX55-205ENST00000538744 VTA1Q9NP79 307 aa22.14■■□□□ 1.13
DDX55-205ENST00000538744 PDGFCQ9NRA1 345 aa22.14■■□□□ 1.13
DDX55-205ENST00000538744 JRKLQ9Y4A0 524 aa22.14■■□□□ 1.13
DDX55-205ENST00000538744 STYXL1Q9Y6J8 313 aa22.14■■□□□ 1.13
DDX55-205ENST00000538744 ATP8B3O60423 1300 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 LRRIQ3A6PVS8 624 aaPredicted RBP22.13■■□□□ 1.13
DDX55-205ENST00000538744 PNMA6AP0CW24 399 aaPredicted RBP22.13■■□□□ 1.13
DDX55-205ENST00000538744 MARK3P27448 753 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 GTF2H1P32780 548 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 BMS1Q14692 1282 aaKnown RBP22.13■■□□□ 1.13
DDX55-205ENST00000538744 KIAA0753Q2KHM9 967 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 IER5Q5VY09 327 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 KRT39Q6A163 491 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 ILDR2Q71H61 639 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 ZNF467Q7Z7K2 595 aaPredicted RBP22.13■■□□□ 1.13
DDX55-205ENST00000538744 TRIM50Q86XT4 487 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 GPR88Q9GZN0 384 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 TMEM8AQ9HCN3 771 aa22.13■■□□□ 1.13
DDX55-205ENST00000538744 ZNF233A6NK53 670 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 EXTL3O43909 919 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 TUBB4BP68371 445 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 MAP2K1Q02750 393 aaPredicted RBP22.12■■□□□ 1.13
DDX55-205ENST00000538744 CAPSQ13938 189 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 PLCB4Q15147 1175 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 ARHGAP44Q17R89 818 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 TEX35Q5T0J7 233 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 SLFN12LQ6IEE8 588 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 UBE2TQ9NPD8 197 aaPredicted RBP22.12■■□□□ 1.13
DDX55-205ENST00000538744 HDAC6Q9UBN7 1215 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 PUF60Q9UHX1 559 aaKnown RBP22.12■■□□□ 1.13
DDX55-205ENST00000538744 NAGPAQ9UK23 515 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 MYH10P35580 1976 aa22.12■■□□□ 1.13
DDX55-205ENST00000538744 ALKBH5Q6P6C2 394 aaKnown RBP22.11■■□□□ 1.13
DDX55-205ENST00000538744 RABGGTAQ92696 567 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 FAM213AQ9BRX8 229 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 SALL4Q9UJQ4 1053 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 NENFQ9UMX5 172 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 COQ4Q9Y3A0 265 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 BTNL10A8MVZ5 291 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 ADCY3O60266 1144 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 LAMC2Q13753 1193 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 ARHGEF19Q8IW93 802 aa22.11■■□□□ 1.13
DDX55-205ENST00000538744 PRPF31Q8WWY3 499 aaKnown RBP22.11■■□□□ 1.13
DDX55-205ENST00000538744 JPH2Q9BR39 696 aaPredicted RBP22.11■■□□□ 1.13
DDX55-205ENST00000538744 CTAGE15A4D2H0 777 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 ZBTB42B2RXF5 422 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 CTAGE8P0CG41 777 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 EFNA5P52803 228 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 NAP1L1P55209 391 aaKnown RBP22.1■■□□□ 1.13
DDX55-205ENST00000538744 ARHGAP1Q07960 439 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 KIF22Q14807 665 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 TMEM63BQ5T3F8 832 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 TAPT1Q6NXT6 567 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 CTAGE6Q86UF2 777 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 CTAGE4Q8IX94 777 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 GPR161Q8N6U8 529 aaKnown RBP22.1■■□□□ 1.13
DDX55-205ENST00000538744 PACSIN1Q9BY11 444 aa22.1■■□□□ 1.13
DDX55-205ENST00000538744 AGO2Q9UKV8 859 aaKnown RBP22.1■■□□□ 1.13
DDX55-205ENST00000538744 IGKV6-21A0A0C4DH24 114 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 RBM47A0AV96 593 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 BUB1O43683 1085 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 HBP1O60381 514 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 GH1P01241 217 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 KLRC1P26715 233 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 DRP2Q13474 957 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 MXD4Q14582 209 aaPredicted RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 FAM110CQ1W6H9 321 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 GPR142Q7Z601 462 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 FBXL13Q8NEE6 735 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 PSPC1Q8WXF1 523 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 POP1Q99575 1024 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 TRPC6Q9Y210 931 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 TRPM7Q96QT4 1865 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 ZNF236Q9UL36 1845 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 TULP1O00294 542 aaPredicted RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 FOXN3O00409 490 aaPredicted RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 DDX3XO00571 662 aaKnown RBP eCLIP22.09■■□□□ 1.134e-17■■■□□ 15.8
DDX55-205ENST00000538744 LRRN2O75325 713 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 LDHAP00338 332 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 TFRCP02786 760 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 DLATP10515 647 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 GPC3P51654 580 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 CKAP4Q07065 602 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 PSMD6Q15008 389 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 FBXO38Q6PIJ6 1188 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 PTPN18Q99952 460 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 TARS2Q9BW92 718 aaKnown RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 SUGCTQ9HAC7 445 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 TOPORSQ9NS56 1045 aaPredicted RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.09■■□□□ 1.13
DDX55-205ENST00000538744 INTUQ9ULD6 942 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 SNX12Q9UMY4 172 aa22.09■■□□□ 1.13
DDX55-205ENST00000538744 RRP9O43818 475 aaKnown RBP22.08■■□□□ 1.12
DDX55-205ENST00000538744 H2AFXP16104 143 aaPredicted RBP22.08■■□□□ 1.12
DDX55-205ENST00000538744 GRB14Q14449 540 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 MAMDC4Q6UXC1 1216 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 DPP9Q86TI2 863 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 SLC30A5Q8TAD4 765 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 U2AF1L4Q8WU68 220 aaKnown RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms