RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
LIMK1-208ENST00000538333 THAP2Q9H0W7 228 aa15.17■□□□□ 0.02
LIMK1-208ENST00000538333 A0A0G2JMZ2 1700 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 RAD51CO43502 376 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 CEP104O60308 925 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 RNF40O75150 1001 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 PHACTR2O75167 634 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 GGCXP38435 758 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 TNNC1P63316 161 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 TAS1R3Q7RTX0 852 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 FAM71AQ8IYT1 594 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■□□□ 14.2
LIMK1-208ENST00000538333 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
LIMK1-208ENST00000538333 NOC2LQ9Y3T9 749 aaKnown RBP15.16■□□□□ 0.02
LIMK1-208ENST00000538333 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 CARSP49589 748 aaKnown RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 HADHBP55084 474 aaKnown RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SP2Q02086 613 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 GUCY2DQ02846 1103 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 NNTQ13423 1086 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 GNPTABQ3T906 1256 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 KRT39Q6A163 491 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 GPC2Q8N158 579 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 TMC2Q8TDI7 906 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 RIN2Q8WYP3 895 aaPredicted RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 EPB41L5Q9HCM4 733 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 TMEM8AQ9HCN3 771 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 ARHGAP28Q9P2N2 729 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SEPT9Q9UHD8 586 aaPredicted RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 COG5Q9UP83 839 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 OTOFQ9HC10 1997 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 GPC3P51654 580 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SP4Q02446 784 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SUPT20HL1Q3ZLR7 823 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 EPS8L1Q8TE68 723 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SHC3Q92529 594 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SEPT11Q9NVA2 429 aaKnown RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
LIMK1-208ENST00000538333 AMFRQ9UKV5 643 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SNCAIPQ9Y6H5 919 aa15.15■□□□□ 0.02
LIMK1-208ENST00000538333 SIP14410 1827 aa15.14■□□□□ 0.02
LIMK1-208ENST00000538333 ESYT3A0FGR9 886 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 GOLGA6BA6NDN3 693 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ICAM3P32942 547 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 CYP24A1Q07973 514 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 TCEAL1Q15170 157 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 BRDTQ58F21 947 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 TSEN2Q8NCE0 465 aaKnown RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 DNERQ8NFT8 737 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 HELQQ8TDG4 1101 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ZNF526Q8TF50 670 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 CASKIN2Q8WXE0 1202 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 CCDC127Q96BQ5 260 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 POP1Q99575 1024 aaKnown RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ERICH4A6NGS2 130 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ATG7O95352 703 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 SGPL1O95470 568 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 CHRNB2P17787 502 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ATP4AP20648 1035 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 GARTP22102 1010 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 ENPEPQ07075 957 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 FSTL1Q12841 308 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 XKR3Q5GH77 459 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 MIS18BP1Q6P0N0 1132 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 KLHL7Q8IXQ5 586 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 PPM1KQ8N3J5 372 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 CHST13Q8NET6 341 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 KCNN1Q92952 543 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 PCDHB18PQ96TA0 734 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-208ENST00000538333 NFU1Q9UMS0 254 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 SBF1O95248 1867 aa15.14■□□□□ 0.01
LIMK1-208ENST00000538333 SORBS3O60504 671 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 FTLP02792 175 aaPredicted RBP15.13■□□□□ 0.01
LIMK1-208ENST00000538333 GTF2H1P32780 548 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 PAK2Q13177 524 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 PRKG1Q13976 671 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 VGLL4Q14135 290 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 DCAF12L1Q5VU92 463 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 LBX2Q6XYB7 198 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 RHOT2Q8IXI1 618 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 TAS1R2Q8TE23 839 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 SH3GL2Q99962 352 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 POLR3FQ9H1D9 316 aaPredicted RBP15.13■□□□□ 0.01
LIMK1-208ENST00000538333 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms