RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TAP1Q03518 808 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TAS2R42Q7RTR8 314 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 RHOT1Q8IXI2 618 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 EFHBQ8N7U6 833 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 KBTBD13C9JR72 458 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 FTLP02792 175 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 PRKCBP05771 671 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 CCNYL1Q8N7R7 359 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 OR6P1Q8NGX9 317 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 RMDN2Q96LZ7 410 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 PLAAQ9Y263 795 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 ASAP2O43150 1006 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 E2F6O75461 281 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 GFPT1Q06210 699 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM59Q8IWR1 403 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 MYO1DO94832 1006 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 SEMA3FQ13275 785 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 PBXIP1Q96AQ6 731 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 KATNAL1Q9BW62 490 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TUFT1Q9NNX1 390 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 NDFIP2Q9NV92 336 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TEKT2Q9UIF3 430 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 TTC7AQ9ULT0 858 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 ZNF197O14709 1029 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 SKIP12755 728 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 SPATA2LQ8IUW3 424 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 PGBD4Q96DM1 585 aa17.85■□□□□ 0.45
SCARB1-205ENST00000538291 CNOT7Q9UIV1 285 aaKnown RBP17.85■□□□□ 0.45
SCARB1-205ENST00000538291 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 EYA4O95677 639 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 CHRNA5P30532 468 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 MORF4L2Q15014 288 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 STRIP1Q5VSL9 837 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 PPM1NQ8N819 430 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 LPAR1Q92633 364 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 CRAMP1Q96RY5 1269 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 POLR3CQ9BUI4 534 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-205ENST00000538291 TIPINQ9BVW5 301 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 KCNQ2O43526 872 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 HSD17B4P51659 736 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 RMDN1Q96DB5 314 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 PNPLA7Q6ZV29 1317 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 YWHABP31946 246 aaKnown RBP17.84■□□□□ 0.45
SCARB1-205ENST00000538291 THEMIS2Q5TEJ8 643 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 SLC7A5P2Q9GIP4 190 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 ABCB6Q9NP58 842 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM33Q9UPN9 1127 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 KCNA1Q09470 495 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 ZNF746Q6NUN9 644 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-205ENST00000538291 RAB42Q8N4Z0 105 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 TRIM4Q9C037 500 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 EMSYQ7Z589 1322 aa17.84■□□□□ 0.45
SCARB1-205ENST00000538291 UBA6A0AVT1 1052 aaPredicted RBP17.83■□□□□ 0.45
SCARB1-205ENST00000538291 DNAJC6O75061 913 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 CDC27P30260 824 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.45
SCARB1-205ENST00000538291 PYGLP06737 847 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 GRIK1P39086 918 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 PPP4R4Q6NUP7 873 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 PIP4K2CQ8TBX8 421 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 EPAS1Q99814 870 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 PARVAQ9NVD7 372 aa17.83■□□□□ 0.45
SCARB1-205ENST00000538291 GRAMD1BQ3KR37 738 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 XKR3Q5GH77 459 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 TBC1D16Q8TBP0 767 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 CENPKQ9BS16 269 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 LSM7Q9UK45 103 aaKnown RBP17.83■□□□□ 0.44
SCARB1-205ENST00000538291 PPP1R12AO14974 1030 aaPredicted RBP17.83■□□□□ 0.44
SCARB1-205ENST00000538291 ALDH1A1P00352 501 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 SNAPC2Q13487 334 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 C12orf60Q5U649 245 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 SARM1Q6SZW1 724 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 EXOC4Q96A65 974 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 BTBD6Q96KE9 485 aa17.83■□□□□ 0.44
SCARB1-205ENST00000538291 AFF4Q9UHB7 1163 aaKnown RBP17.83■□□□□ 0.44
SCARB1-205ENST00000538291 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 CHRNA3P32297 505 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 RASSF3Q86WH2 238 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 SLC26A7Q8TE54 656 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 MRPL40Q9NQ50 206 aaKnown RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 CRB1P82279 1406 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 PFASO15067 1338 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 FAM95CA0A1B0GW59 222 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 GGPS1O95749 300 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 TRIM49P0CI25 452 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 TRIM49CP0CI26 452 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 LCP1P13796 627 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 CDH6P55285 790 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 GPS1Q13098 491 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-205ENST00000538291 CEP19Q96LK0 163 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 STXBP3O00186 592 aa17.82■□□□□ 0.44
SCARB1-205ENST00000538291 DEUP1Q05D60 604 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms