RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NLRP11P59045 1033 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 EXOSC10Q01780 885 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 NUDT18Q6ZVK8 323 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 SMAP1Q8IYB5 467 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 ASIC4Q96FT7 647 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PBKQ96KB5 322 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 DHX35Q9H5Z1 703 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 STARD7Q9NQZ5 370 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ATP8A1Q9Y2Q0 1164 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 GOLGA8MH3BSY2 632 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 RNF40O75150 1001 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ZNF286BP0CG31 522 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 KRT3P12035 628 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PAMP19021 973 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 SLMAPQ14BN4 828 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 KDELC2Q7Z4H8 507 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 CCDC170Q8IYT3 715 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PPFIBP2Q8ND30 876 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 RNF25Q96BH1 459 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 PPP2R3BQ9Y5P8 575 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 RRN3P2A6NIE6 340 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 TRPA1O75762 1119 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 GPC5P78333 572 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 CDR2LQ86X02 465 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 RTFDC1Q9BY42 306 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 SLC7A5P2Q9GIP4 190 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 FAM114A2Q9NRY5 505 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 DONSONQ9NYP3 566 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 PQBP1O60828 265 aaKnown RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 PALMO75781 387 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 VTNP04004 478 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 ATICP31939 592 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 ALDH7A1P49419 539 aaKnown RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 RBP5P82980 135 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 FOXD4Q12950 439 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 TTC19Q6DKK2 380 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 PCGF5Q86SE9 256 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 ZNF564Q8TBZ8 553 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 ZNF512Q96ME7 567 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 YME1L1Q96TA2 773 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 OGFRQ9NZT2 677 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 PRG3Q9Y2Y8 225 aaPredicted RBP5.71□□□□□ -1.49
LRP6-203ENST00000538239 PPME1Q9Y570 386 aa5.71□□□□□ -1.49
LRP6-203ENST00000538239 AP3M2P53677 418 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 ACTR2P61160 394 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 IRX4P78413 519 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 ZC2HC1CQ53FD0 456 aaPredicted RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 B4GALNT4Q76KP1 1039 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 RNF217Q8TC41 542 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 DDX50Q9BQ39 737 aaKnown RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 KIFC3Q9BVG8 833 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 LSM7Q9UK45 103 aaKnown RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 STK38LQ9Y2H1 464 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 JRKLQ9Y4A0 524 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CNTNAP5Q8WYK1 1306 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 MANSC4A6NHS7 340 aaPredicted RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 GPC4O75487 556 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 TOM1L1O75674 476 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 DR1Q01658 176 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 NOTUMQ6P988 496 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 FBXL13Q8NEE6 735 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 TIPINQ9BVW5 301 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 KLC2Q9H0B6 622 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 AFF4Q9UHB7 1163 aaKnown RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 SH3BP1Q9Y3L3 701 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SLC4A7Q9Y6M7 1214 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CYP26A1O43174 497 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 LRG1P02750 347 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CYP2C8P10632 490 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SLCO1A2P46721 670 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 ALDH1A3P47895 512 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CDK17Q00537 523 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 ASPHQ12797 758 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SHC4Q6S5L8 630 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CPB2Q96IY4 423 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 MROH8Q9H579 483 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 PLEKHA5Q9HAU0 1116 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 HOMER3Q9NSC5 361 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 PDS5AQ29RF7 1337 aaKnown RBP5.71□□□□□ -1.5
LRP6-203ENST00000538239 IL1RL1Q01638 556 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 DRP2Q13474 957 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 AMHR2Q16671 573 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SV2CQ496J9 727 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 GLRA4Q5JXX5 417 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 CCHCR1Q8TD31 782 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 NUF2Q9BZD4 464 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 PPP1R12CQ9BZL4 782 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 SLC38A7Q9NVC3 462 aa5.71□□□□□ -1.5
LRP6-203ENST00000538239 LGALS16A8MUM7 142 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 GOLGA8KD6RF30 607 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 MFAP3LO75121 409 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 CD4P01730 458 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 FTLP02792 175 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 ST8SIA6P61647 398 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms