RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ADGRA3Q8IWK6 1321 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 AGPSO00116 658 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 HEXIM1O94992 359 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 ATG7O95352 703 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 GARTP22102 1010 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 ABCD1P33897 745 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 GPC3P51654 580 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 RNASE9P60153 205 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 MAP2K1Q02750 393 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 STXBP2Q15833 593 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 NLGN2Q8NFZ4 835 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SHC3Q92529 594 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SEMA4DQ92854 862 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 KAT5Q92993 513 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 KREMEN1Q96MU8 473 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 ARHGAP28Q9P2N2 729 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 KCNG1Q9UIX4 513 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SNCAIPQ9Y6H5 919 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 H0YCG3 227 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 CLSTN1O94985 981 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 ABCB4P21439 1286 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 MFAP3P55082 362 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 SP2Q02086 613 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 CYP24A1Q07973 514 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 USP37Q86T82 979 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 RHOT2Q8IXI1 618 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 CCDC127Q96BQ5 260 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 IFT74Q96LB3 600 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 DIS3Q9Y2L1 958 aaKnown RBP12.34□□□□□ -0.43
SLC28A1-204ENST00000538177 RAD51CO43502 376 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 GGCXP38435 758 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 CARSP49589 748 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 SP4Q02446 784 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PAK2Q13177 524 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 EIF1ADQ8N9N8 165 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 HELQQ8TDG4 1101 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 POMGNT1Q8WZA1 660 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 SEPT11Q9NVA2 429 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 CCDC188H7C350 402 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 RNF40O75150 1001 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PHACTR2O75167 634 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 RTN2O75298 545 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 SGPL1O95470 568 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 GZMAP12544 262 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 CHRNB2P17787 502 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 ATP4AP20648 1035 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 SCP2P22307 547 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 VGLL4Q14135 290 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PTPROQ16827 1216 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 ALS2CLQ60I27 953 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 FBXL13Q8NEE6 735 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 PCDHB18PQ96TA0 734 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 COG5Q9UP83 839 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 ARID2Q68CP9 1835 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
SLC28A1-204ENST00000538177 LCTP09848 1927 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 HNRNPDLO14979 420 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 PRKG1Q13976 671 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 MTERF2Q49AM1 385 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 SV2AQ7L0J3 742 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 NOP9Q86U38 636 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 CASKIN2Q8WXE0 1202 aa12.32□□□□□ -0.44
SLC28A1-204ENST00000538177 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms