RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 ATXN2LQ8WWM7 1075 aaKnown RBP5.03□□□□□ -1.6
SNHG1-203ENST00000537024 FUBP3Q96I24 572 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNHG1-203ENST00000537024 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 LUC7LQ9NQ29 371 aaKnown RBP5.03□□□□□ -1.6
SNHG1-203ENST00000537024 TOMM22Q9NS69 142 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 PCMTD2Q9NV79 361 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 LMCD1Q9NZU5 365 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 ZNF652Q9Y2D9 606 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 LUC7L2Q9Y383 392 aaKnown RBP5.03□□□□□ -1.6
SNHG1-203ENST00000537024 NOC2LQ9Y3T9 749 aaKnown RBP5.03□□□□□ -1.6
SNHG1-203ENST00000537024 NUB1Q9Y5A7 615 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 TAF6LQ9Y6J9 622 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 SCN9AQ15858 1988 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 LRRC37AA6NMS7 1700 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 CFAP54Q96N23 3096 aa5.03□□□□□ -1.6
SNHG1-203ENST00000537024 PSME4Q14997 1843 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 FAM205AQ6ZU69 1335 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GOLGA6CA6NDK9 693 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GOLGA6BA6NDN3 693 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SCDO00767 359 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 TGM5O43548 720 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 MAFKO60675 156 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 EIF5BO60841 1220 aaKnown RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 PPP1R11O60927 126 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 STARD3NLO95772 234 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 MAP4K4O95819 1239 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 CFBP00751 764 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GOLGA6DP0CG33 693 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 ZBTB48P10074 688 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 ZSCAN20P17040 1043 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SYN1P17600 705 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 RPS12P25398 132 aaKnown RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GRIK1P39086 918 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 IL6STP40189 918 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 KIF11P52732 1056 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 NHLH1Q02575 133 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SLC39A6Q13433 755 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GALNT18Q6P9A2 607 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 RIOX2Q8IUF8 465 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 ANKS4BQ8N8V4 417 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SUPT20HQ8NEM7 779 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 PLEKHO2Q8TD55 490 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 LINC01599Q8WXQ3 324 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 ASB2Q96Q27 587 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 MTA3Q9BTC8 594 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 G6PC3Q9BUM1 346 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 TTYH1Q9H313 450 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SLC6A20Q9NP91 592 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 C14orf119Q9NWQ9 140 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 GOLGA6AQ9NYA3 693 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SLAMF8Q9P0V8 285 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 IMPACTQ9P2X3 320 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 DSEQ9UL01 958 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 NOB1Q9ULX3 412 aaKnown RBP5.02□□□□□ -1.61
SNHG1-203ENST00000537024 SRPK3Q9UPE1 567 aa5.02□□□□□ -1.61
SNHG1-203ENST00000537024 COL3A1P02461 1466 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 DDX60LQ5H9U9 1706 aaKnown RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 TCRBV5S4A2TA0A5A2 114 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 MAN2B1O00754 1011 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 FYB1O15117 783 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ABLIM3O94929 683 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 TGFB1P01137 390 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ZGLP1P0C6A0 271 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CD96P40200 585 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 PRMT2P55345 433 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 PHC1P78364 1004 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CHRNEQ04844 493 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ZP2Q05996 745 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 BNIP3Q12983 259 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 TERF2Q15554 542 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 HSF5Q4G112 596 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 PLEKHO1Q53GL0 409 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 FAM102BQ5T8I3 360 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CPZQ66K79 652 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CCSAPQ6IQ19 270 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 PGM2L1Q6PCE3 622 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CLEC4GQ6UXB4 293 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 C14orf80Q86SX3 495 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CABP7Q86V35 215 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 RASSF3Q86WH2 238 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 SPPL2CQ8IUH8 684 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 NOSTRINQ8IVI9 506 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CBARPQ8N350 705 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 UHMK1Q8TAS1 419 aaKnown RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 JPH3Q8WXH2 748 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ZNF496Q96IT1 587 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ELF4Q99607 663 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-203ENST00000537024 SLC13A1Q9BZW2 595 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 CD244Q9BZW8 370 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ARHGAP39Q9C0H5 1083 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 ADAMTS10Q9H324 1103 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 EPHX3Q9H6B9 360 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 SP110Q9HB58 689 aa5.01□□□□□ -1.61
SNHG1-203ENST00000537024 PDLIM7Q9NR12 457 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms