RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SLC7A3Q8WY07 619 aa14.11□□□□□ -0.15
CDK5RAP3-202ENST00000536708 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-202ENST00000536708 TSPYL1Q9H0U9 437 aa14.11□□□□□ -0.15
CDK5RAP3-202ENST00000536708 NRBP2Q9NSY0 501 aa14.11□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SEPT4O43236 478 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 F2P00734 622 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ATP1A1P05023 1023 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 INHAP05111 366 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MYL3P08590 195 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MAP3K21Q5TCX8 1036 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 NOA1Q8NC60 698 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MCPH1Q8NEM0 835 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 CCDC42Q96M95 316 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 CEP63Q96MT8 703 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 KCTD10Q9H3F6 313 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ABCB6Q9NP58 842 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 WBP1LQ9NX94 342 aa14.1□□□□□ -0.15
CDK5RAP3-202ENST00000536708 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 TISP43B9A030 160 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ZNF263O14978 683 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 DUSP11O75319 330 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 PPP1R37O75864 691 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 C22orf31O95567 290 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 PRLRP16471 622 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MCM3P25205 808 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 HOXD10P28358 340 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 NPTX2P47972 431 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SLC26A2P50443 739 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 CLCN3P51790 818 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MARSP56192 900 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 VSNL1P62760 191 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 FKBP3Q00688 224 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 KIF5AQ12840 1032 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SPA17Q15506 151 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 DNAJC5GQ8N7S2 189 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SH3TC2Q8TF17 1288 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 BAP1Q92560 729 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SUGCTQ9HAC7 445 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 LARSQ9P2J5 1176 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 CCDC169A6NNP5 214 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 HBP1O60381 514 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 GNA14O95837 355 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MYCP01106 439 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 GLRA2P23416 452 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 CPT1AP50416 773 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 HIC1Q14526 733 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 KIAA0753Q2KHM9 967 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 ZNF720Q7Z2F6 126 aa14.09□□□□□ -0.15
CDK5RAP3-202ENST00000536708 SSU72P8A0A1W2PR75 194 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PJA2O43164 708 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ADAMTS4O75173 837 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RHOXF2BP0C7M4 288 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RARBP10826 455 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RFC5P40937 340 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PPFIA1Q13136 1202 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GPS2Q13227 327 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 DMP1Q13316 513 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 BMT2Q1RMZ1 405 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ZNF572Q7Z3I7 529 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TRIM58Q8NG06 486 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SYN2Q92777 582 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KIFAP3Q92845 792 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SECISBP2LQ93073 1101 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PPP1R16BQ96T49 567 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RHOXF2Q9BQY4 288 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TIPINQ9BVW5 301 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NUCKS1Q9H1E3 243 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 XPNPEP3Q9NQH7 507 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PSD3Q9NYI0 1048 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 USP20Q9Y2K6 914 aa14.08□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ENC1O14682 589 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EPHB6O15197 1021 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GNRH1P01148 92 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NCKAP1LP55160 1127 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GJA9P57773 515 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ITIH3Q06033 890 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CAPSQ13938 189 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MFSD10Q14728 455 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GRIK4Q16099 956 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ASTE1Q2TB18 679 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MARCH8Q5T0T0 291 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PDXDC1Q6P996 788 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CXCL17Q6UXB2 119 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 HAUS6Q7Z4H7 955 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TMEM161BQ8NDZ6 487 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MMS19Q96T76 1030 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms